AutismKB 2.0

Annotation Detail for SLC38A11


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Basic Information Top
Gene Symbol:SLC38A11 ( AVT2,FLJ39822,MGC150450 )
Gene Full Name: solute carrier family 38, member 11
Band: 2q24.3
Quick LinksEntrez ID:151258; OMIM: NA; Uniprot ID:S38AB_HUMAN; ENSEMBL ID: ENSG00000169507; HGNC ID: 26836
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
44N-linked (GlcNAc...) (Potential).
275N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_173512
  • Location:chr2 165463057-165520280
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 165526585 165526617 32 6321
ER E2-MCF7GSE14664 165537258 165537433 175 17065
ER Fulvestrant-MCF7GSE14664 165526585 165526618 33 6321
ER Fulvestrant-MCF7GSE14664 165537373 165537437 64 17125
LIN9 SGSE7516 165520551 165520751 200 371
Oct1 HelaGSE14283 165526587 165526615 28 6321
P300 T30-glioblastomaGSE21026 165532327 165533139 812 12453
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 165445639 165445689 50 17394
Oct1 HelaGSE14283 165459983 165460042 59 3045
P300 T30-glioblastomaGSE21026 165461269 165461801 532 1523
p63 keratinocytesGSE17611 165446059 165446909 850 16574
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 165482102 165482364 262 0
CTCF G2GSE9613 165519997 165520278 281 0
ER E2-MCF7GSE14664 165478355 165478423 68 0
ER E2-MCF7GSE14664 165483122 165483174 52 0
ER E2-MCF7GSE14664 165485633 165485752 119 0
ER Fulvestrant-MCF7GSE14664 165498722 165498787 65 0
ER Fulvestrant-MCF7GSE14664 165499824 165499864 40 0
Nanog hESGSE18292 165492692 165493003 311 0
Nanog hESGSE18292 165499695 165500224 529 0
Oct1 HelaGSE14283 165471903 165471947 44 0
Oct1 HelaGSE14283 165490310 165490336 26 0
P300 T30-glioblastomaGSE21026 165485213 165485642 429 0
PAX3-FKHR Rh4GSE19063 165462783 165463899 1116 0
RARA MCF7GSE15244 165478264 165479248 984 0
RNAII Tamoxifen-MCF7GSE14664 165506859 165506897 38 0
STAT1 HeLaGSE12782 165474190 165476006 1816 0
STAT1 HeLaGSE12783 165462905 165463725 820 0
STAT1 HeLaGSE12783 165474275 165475972 1697 0
STAT1 IFNSISSRdata 165474588 165475801 1213 0
Validated miRNA targets Top
Cis-Nats regulation Top

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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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