Annotation Detail for FAM82A1

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Basic Information Top

Gene Symbol:	FAM82A1 ( FAM82A,FLJ32954,FLJ38143,MGC33318,PRO34163,PYST9371,RMD2,RMD4 )
Gene Full Name:	family with sequence similarity 82, member A1
Band:	2p22.2
Quick Links	Entrez ID:151393; OMIM: 611872; Uniprot ID:RMD2_HUMAN; ENSEMBL ID: ENSG00000115841; HGNC ID:
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_144713
Location:chr2 38031109-38147783
strand:+

Upstream the gene:3 results
Downstream the gene:0 results
Inside the gene:15 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	38011161	38011520	359	19769
Oct1	H2O2-Hela	GSE14283	38012878	38012905	27	18218
Oct1	Hela	GSE14283	38028133	38028166	33	2960

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	38062638	38063280	642	0
NFkBII	GM12878	GSE19485	38117550	38119633	2083	0
Nanog	hES	GSE18292	38075048	38075408	360	0
Oct1	H2O2-Hela	GSE14283	38118088	38118147	59	0
Oct1	Hela	GSE14283	38112560	38112591	31	0
Oct1	Hela	GSE14283	38117844	38117877	33	0
Oct1	Hela	GSE14283	38118073	38118147	74	0
P300	T30-glioblastoma	GSE21026	38138418	38139283	865	0
Rb	Growing	GSE19898	38081975	38082135	160	0
hScc1	Bcell	GSE12603	38062602	38063241	639	0
hScc1	Bcell	GSE12603	38118638	38118830	192	0
hScc1	CdLS	GSE12603	38062602	38063316	714	0
hScc1	G2	GSE9613	38062638	38063203	565	0
hScc1	G2	GSE9613	38065252	38065468	216	0
p63	keratinocytes	GSE17611	38107360	38108065	705	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
14150	mRNA	FLJ32954	chr2	38089256	38205931	96	EST		chr2	38205766	38209491	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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