Annotation Detail for RUNDC3B

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Basic Information Top

Gene Symbol:	RUNDC3B ( FLJ30671,MGC26655,RPIB9,RPIP9 )
Gene Full Name:	RUN domain containing 3B
Band:	7q21.12
Quick Links	Entrez ID:154661; OMIM: NA; Uniprot ID:RUN3B_HUMAN; ENSEMBL ID: ENSG00000105784; HGNC ID: 30286
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
460	Phosphoserine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_138290
Location:chr7 87095664-87297690
strand:+

Upstream the gene:0 results
Downstream the gene:0 results
Inside the gene:18 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	87265076	87265389	313	0
CTCF	CD4	SISSRdata	87265076	87265389	313	0
CTCF	G2	GSE9613	87095764	87096171	407	0
CTCF	G2	GSE9613	87264976	87265311	335	0
ER	Fulvestrant-MCF7	GSE14664	87131011	87131053	42	0
FoxA1	MCF7	MACSdata	87173277	87173493	216	0
Nanog	ES	GSE20650	87206536	87206894	358	0
Oct1	H2O2-Hela	GSE14283	87175473	87175510	37	0
Oct1	H2O2-Hela	GSE14283	87259279	87259313	34	0
Oct1	Hela	GSE14283	87118277	87118349	72	0
Oct1	Hela	GSE14283	87131012	87131056	44	0
Oct1	Hela	GSE14283	87175480	87175509	29	0
Oct1	Hela	GSE14283	87259279	87259313	34	0
Oct1	Hela	GSE14283	87278911	87278949	38	0
Sox2	hES	GSE18292	87265128	87265556	428	0
hScc1	Bcell	GSE12603	87265016	87265453	437	0
hScc1	CdLS	GSE12603	87264976	87265533	557	0
hScc1	G2	GSE9613	87264976	87265421	445	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
24267	mRNA	RPIB9	chr7	86902379	87104406	84836	mRNA	ABCB1	chr7	86777598	86987215	Non-exonic Bidirectional (NOB) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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