Annotation Detail for LCN6
Basic Information Top
| Gene Symbol: | LCN6 ( LCN5,UNQ643,hLcn5 ) |
|---|---|
| Gene Full Name: | lipocalin 6 |
| Band: | 9q34.3 |
| Quick Links | Entrez ID:158062; OMIM: 609379; Uniprot ID:LCN6_HUMAN; ENSEMBL ID: ENSG00000204003; HGNC ID: 17337 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 64 | Phosphothreonine(MAPK) | HMM predict |
| 144 | Phosphoserine(ATM) | HMM predict |
| 144 | Phosphoserine(IKK) | HMM predict |
- RefSeq ID: NM_198946
- Location:chr9 138758292-138762800
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| hScc1 | Bcell | GSE12603 | 138763173 | 138763627 | 454 | 600 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| hScc1 | Bcell | GSE12603 | 138757356 | 138758438 | 1082 | 396 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| hScc1 | Bcell | GSE12603 | 138759144 | 138759386 | 242 | 0 |
| hScc1 | Bcell | GSE12603 | 138759909 | 138761535 | 1626 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27231 | mRNA | chr9 | 136916449 | 136920200 | 275 | mRNA | LCN6 | chr9 | 136914308 | 136918817 | Sense/Antisense (SA) pairs | |