Annotation Detail for RHOXF1

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Basic Information Top

Gene Symbol:	RHOXF1 ( MGC119030,MGC119033,OTEX,PEPP1 )
Gene Full Name:	Rhox homeobox family, member 1
Band:	Xq24
Quick Links	Entrez ID:158800; OMIM: 300446; Uniprot ID:RHXF1_HUMAN; ENSEMBL ID: ENSG00000101883; HGNC ID: 29993
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
164	Nuclear localization signal.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_139282
Location:chrX 119127052-119133874
strand:-

Upstream the gene:6 results
Downstream the gene:2 results
Inside the gene:1 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CBP	T30-glioblastoma	GSE21026	119137975	119138779	804	4503
CTCF	G2	GSE9613	119153756	119153979	223	19993
ER	Fulvestrant-MCF7	GSE14664	119152354	119152417	63	18511
P300	T0-glioblastoma	GSE21026	119138197	119138745	548	4597
P300	T30-glioblastoma	GSE21026	119138183	119138863	680	4649
hScc1	G2	GSE9613	119153756	119153979	223	19993

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Oct1	H2O2-Hela	GSE14283	119117185	119117217	32	9852
Oct1	Hela	GSE14283	119117187	119117217	30	9851

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	119133457	119133717	260	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
28077	mRNA		chrX	118952082	119062642	6823	mRNA	OTEX	chrX	119024906	119031729	Non-exonic Bidirectional (NOB) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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