AutismKB 2.0

Annotation Detail for PGBD4


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Basic Information Top
Gene Symbol:PGBD4 ( FLJ32638,FLJ37497 )
Gene Full Name: piggyBac transposable element derived 4
Band: 15q14
Quick LinksEntrez ID:161779; OMIM: NA; Uniprot ID:PGBD4_HUMAN; ENSEMBL ID: ENSG00000182405; HGNC ID: 19401
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
8Phosphoserine(PKG)HMM predict
26Phosphoserine(CK2)HMM predict
30Phosphoserine(CK2)HMM predict
33Phosphoserine(CK1)HMM predict
40N-linkedHMM predict
42Phosphoserine(CK1)HMM predict
63Phosphoserine(IKK)HMM predict
65Phosphothreonine(PKC)HMM predict
66Phosphoserine(CK1)HMM predict
67Phosphoserine(CK1)HMM predict
69O-linkedHMM predict
69Phosphoserine(IKK)HMM predict
91Phosphothreonine(CDC2)HMM predict
91Phosphothreonine(MAPK)HMM predict
203S-palmitoylHMM predict
208N-linkedHMM predict
209N-linkedHMM predict
242Phosphothreonine(CDC2)HMM predict
242Phosphothreonine(CDK)HMM predict
346N-linkedHMM predict
401N-linkedHMM predict
415Phosphothreonine(PKC)HMM predict
511Phosphoserine(ATM)HMM predict
515Phosphothreonine(MAPK)HMM predict
536N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_152595
  • Location:chr15 32181565-32185926
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 32180884 32182030 1146 109
Nanog ESGSE20650 32181185 32181759 574 94
Oct4 hESGSE17917 32181245 32181741 496 73
P300 T30-glioblastomaGSE21026 32180822 32182209 1387 50
PHF8 293TGSE20725 32180796 32182212 1416 62
p130 SenescentGSE19898 32181220 32181733 513 89
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 32189668 32189861 193 3838
CTCF CD4SISSRdata 32189668 32189861 193 3838
Nanog hESGSE18292 32189679 32189992 313 3909
Oct1 HelaGSE14283 32199194 32199231 37 13286
hScc1 BcellGSE12603 32189608 32189897 289 3826
hScc1 CdLSGSE12603 32189608 32190034 426 3895
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me3 colorectalcancer 32181547 32181755 208 0
P300 T0-glioblastomaGSE21026 32181152 32182158 1006 0
TAF HelaGSE8489 32182159 32182701 542 0
p130 QuiescentGSE19898 32181346 32181948 602 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018