Annotation Detail for C18orf54
Basic Information Top
| Gene Symbol: | C18orf54 ( LAS2,MGC33382 ) |
|---|---|
| Gene Full Name: | chromosome 18 open reading frame 54 |
| Band: | 18q21.2 |
| Quick Links | Entrez ID:162681; OMIM: 613258; Uniprot ID:CR054_HUMAN; ENSEMBL ID: ENSG00000166845; HGNC ID: 13796 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 6 | Phosphothreonine(PKC) | HMM predict |
| 12 | Phosphoserine(ATM) | HMM predict |
| 16 | Phosphoserine(IKK) | HMM predict |
| 29 | Phosphoserine(IKK) | HMM predict |
| 30 | N-linked | HMM predict |
| 33 | N-linked | HMM predict |
| 45 | Phosphotyrosine(INSR) | HMM predict |
| 81 | N-linked | HMM predict |
| 87 | N-linked | HMM predict |
| 122 | Phosphoserine(IKK) | HMM predict |
| 124 | Phosphothreonine(CK2) | HMM predict |
| 227 | Phosphoserine(IKK) | HMM predict |
| 249 | Phosphoserine(CDC2) | HMM predict |
| 262 | Phosphothreonine(PKC) | HMM predict |
| 267 | Phosphoserine(PKG) | HMM predict |
| 280 | N-linked | HMM predict |
| 314 | N-linked | HMM predict |
| 332 | Phosphoserine(CK1) | HMM predict |
- RefSeq ID: NM_173529
- Location:chr18 50139168-50162378
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 50138038 | 50138313 | 275 | 993 |
| CTCF | CD4 | SISSRdata | 50138038 | 50138313 | 275 | 993 |
| CTCF | Hela | GSE12889 | 50138104 | 50138279 | 175 | 977 |
| CTCF | G2 | GSE9613 | 50137916 | 50138862 | 946 | 780 |
| E2F4 | G0 | GSE7516 | 50137843 | 50138897 | 1054 | 799 |
| ER | E2-MCF7 | GSE14664 | 50138519 | 50138558 | 39 | 630 |
| H3K4me3 | colorectal | cancer | 50138345 | 50139469 | 1124 | 262 |
| H3ac | HepG2 | E | 50138384 | 50139173 | 789 | 390 |
| LIN9 | G0 | GSE7516 | 50137880 | 50139469 | 1589 | 494 |
| LIN9 | S | GSE7516 | 50137952 | 50139173 | 1221 | 606 |
| Rb | Growing | GSE19898 | 50138002 | 50138355 | 353 | 990 |
| Rb | Quiescent | GSE19898 | 50138039 | 50138439 | 400 | 930 |
| Rb | shRbQuiescent | GSE19898 | 50137933 | 50138272 | 339 | 1066 |
| hScc1 | Bcell | GSE12603 | 50137810 | 50139153 | 1343 | 687 |
| p130 | Quiescent | GSE19898 | 50137824 | 50138578 | 754 | 968 |
| p130 | Senescent | GSE19898 | 50137828 | 50138800 | 972 | 855 |
| p130 | shRbQuiescent | GSE19898 | 50137807 | 50138503 | 696 | 1014 |
| p130 | shRbSenescent | GSE19898 | 50137783 | 50138977 | 1194 | 789 |
| p130 | G0 | GSE7516 | 50137810 | 50139153 | 1343 | 687 |
| p130 | S | GSE7516 | 50138050 | 50138545 | 495 | 871 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 50172893 | 50173244 | 351 | 10690 |
| CTCF | CD4 | SISSRdata | 50172893 | 50173244 | 351 | 10690 |
| Fos | K562 | GSE19551 | 50169060 | 50169609 | 549 | 6956 |
| P300 | T30-glioblastoma | GSE21026 | 50168976 | 50169462 | 486 | 6841 |
| hScc1 | Bcell | GSE12603 | 50172991 | 50173275 | 284 | 10755 |
| hScc1 | CdLS | GSE12603 | 50172991 | 50173351 | 360 | 10793 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | Fulvestrant-MCF7 | GSE14664 | 50146653 | 50146738 | 85 | 0 |
Validated miRNA targets