Annotation Detail for ZNF540
Basic Information Top
| Gene Symbol: | ZNF540 ( DKFZp313K2238,DKFZp547B0714,FLJ16004,Nbla10512 ) |
|---|---|
| Gene Full Name: | zinc finger protein 540 |
| Band: | 19q13.13 |
| Quick Links | Entrez ID:163255; OMIM: NA; Uniprot ID:ZN540_HUMAN; ENSEMBL ID: ENSG00000171817; HGNC ID: 25331 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 140 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 7 | Phosphothreonine(PKC) | HMM predict |
| 100 | Phosphoserine(CK1) | HMM predict |
| 110 | Phosphothreonine(PKC) | HMM predict |
| 124 | N-linked | HMM predict |
| 140 | Phosphoserine(ATM) | HMM predict |
| 217 | S-palmitoyl | HMM predict |
| 243 | Phosphotyrosine(Syk) | HMM predict |
| 294 | Phosphothreonine(PKC) | HMM predict |
| 299 | Phosphotyrosine(EGFR) | HMM predict |
| 299 | Phosphotyrosine(Jak) | HMM predict |
| 322 | Phosphothreonine(PKC) | HMM predict |
| 376 | Phosphothreonine(PKA) | HMM predict |
| 500 | S-palmitoyl | HMM predict |
| 523 | Phosphotyrosine(Jak) | HMM predict |
| 642 | Lysine | HMM predict |
- RefSeq ID: NM_152606
- Location:chr19 42734147-42796833
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K4me3 | colorectal | cancer | 42731340 | 42731893 | 553 | 2531 |
| Oct1 | Hela | GSE14283 | 42730710 | 42730747 | 37 | 3419 |
| p130 | shRbQuiescent | GSE19898 | 42733550 | 42734038 | 488 | 354 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 42734592 | 42734726 | 134 | 0 |
| CTCF | CD4 | SISSRdata | 42734592 | 42734726 | 134 | 0 |
| CTCF | G2 | GSE9613 | 42734528 | 42734728 | 200 | 0 |
| H3ac | HepG2 | E | 42777566 | 42778335 | 769 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 42777126 | 42778005 | 879 | 0 |
| hScc1 | Bcell | GSE12603 | 42734528 | 42734728 | 200 | 0 |
| hScc1 | G2 | GSE9613 | 42734528 | 42734728 | 200 | 0 |
Validated miRNA targets