AutismKB 2.0

Annotation Detail for DENND1B


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Basic Information Top
Gene Symbol:DENND1B ( C1ORF18,C1orf218,DKFZp547O0715,FAM31B,FLJ20054,FLJ21179,FLJ33888,MGC103810,MGC27044 )
Gene Full Name: DENN/MADD domain containing 1B
Band: 1q31.3
Quick LinksEntrez ID:163486; OMIM: 613292; Uniprot ID:DEN1B_HUMAN; ENSEMBL ID: ENSG00000213047; HGNC ID: 28404
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_144977
  • Location:chr1 195788007-196010944
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
KLF4 hESGSE17917 196010863 196011309 446 142
KLF4 hESGSE17917 196024853 196025012 159 13988
Oct1 HelaGSE14283 196021256 196021350 94 10359
PHF8 Hs68plusFBSGSE20725 196010094 196012185 2091 195
TAF k562GSE8489 196011534 196012715 1181 1180
hScc1 BcellGSE12603 196010725 196011455 730 146
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 195850966 195851281 315 0
CTCF CD4SISSRdata 195850966 195851281 315 0
CTCF G2GSE9613 195850932 195851218 286 0
CTCF G2GSE9613 196010504 196011385 881 0
ER E2-MCF7GSE14664 195849557 195849589 32 0
FoxA1 MCF7MACSdata 195899130 195899380 250 0
H3K4me3 colorectalcancer 196009338 196009671 333 0
H3K4me3 colorectalcancer 196010051 196010815 764 0
Myc K562GSE19551 195911442 195911895 453 0
Nanog ESGSE20650 195936506 195936779 273 0
Nanog hESGSE18292 195830978 195831505 527 0
Oct1 HelaGSE14283 195820303 195820345 42 0
Oct1 HelaGSE14283 195851957 195851986 29 0
Oct1 HelaGSE14283 195878134 195878177 43 0
Oct1 HelaGSE14283 195915164 195915193 29 0
RNAII Tamoxifen-MCF7GSE14664 195820303 195820342 39 0
Rb shRbQuiescentGSE19898 195899077 195899305 228 0
TAF k562GSE8489 196008806 196010504 1698 0
TFAP2C MCF7GSE21234 195899124 195899534 410 0
TFAP2C MCF7GSE21234 195919461 195919892 431 0
USF1 HepG2E 195884147 195884351 204 0
hScc1 BcellGSE12603 195850968 195851218 250 0
hScc1 CdLSGSE12603 195850685 195851296 611 0
p63 keratinocytesGSE17611 195996589 195997223 634 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
2112 EST chr1 194458105 194462752 4647 mRNA FAM31B chr1 194253041 194475979 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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