AutismKB 2.0

Annotation Detail for TDRD5


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Basic Information Top
Gene Symbol:TDRD5 ( FLJ34823,MGC163404,RP11-427G13.1,TUDOR3 )
Gene Full Name: tudor domain containing 5
Band: 1q25.2
Quick LinksEntrez ID:163589; OMIM: NA; Uniprot ID:TDRD5_HUMAN; ENSEMBL ID: ENSG00000162782; HGNC ID: 20614
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
195Phosphoserine.
Location(AA) Modifications Resource
195Phosphoserine.Swiss-Prot 53.0
Location(AA) Modification Resource
146Phosphoserine(MAPK)HMM predict
187Phosphoserine(CK1)HMM predict
195Phosphoserine(CAMK2)HMM predict
204Phosphothreonine(PKC)HMM predict
218Phosphothreonine(PKC)HMM predict
240Phosphoserine(ATM)HMM predict
244Phosphoserine(IKK)HMM predict
258Phosphothreonine(CK2)HMM predict
270N-linkedHMM predict
276N-linkedHMM predict
340N-linkedHMM predict
390Phosphoserine(CDC2)HMM predict
395Phosphoserine(PKG)HMM predict
404O-linkedHMM predict
438N-linkedHMM predict
443N-linkedHMM predict
482Phosphoserine(ATM)HMM predict
484Phosphoserine(ATM)HMM predict
640Phosphoserine(CK2)HMM predict
663N-linkedHMM predict
697Phosphoserine(ATM)HMM predict
709Phosphoserine(CDC2)HMM predict
709Phosphoserine(CDK)HMM predict
787Phosphothreonine(CDC2)HMM predict
803N-linkedHMM predict
825N-linkedHMM predict
834N-linkedHMM predict
839Phosphoserine(IKK)HMM predict
862Phosphoserine(IKK)HMM predict
862Phosphoserine(ATM)HMM predict
867N-linkedHMM predict
868N-linkedHMM predict
869Phosphoserine(ATM)HMM predict
880O-linkedHMM predict
886O-linkedHMM predict
887O-linkedHMM predict
899Phosphoserine(ATM)HMM predict
899O-linkedHMM predict
899Phosphoserine(CK1)HMM predict
913Phosphoserine(CK1)HMM predict
928Phosphoserine(CAMK2)HMM predict
952O-linkedHMM predict
965Phosphothreonine(PKC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_173533
  • Location:chr1 177827647-177927020
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 177822345 177822551 206 5200
Oct1 HelaGSE14283 177824240 177824281 41 3387
TFAP2C MCF7GSE21234 177827194 177827618 424 242
hScc1 BcellGSE12603 177822190 177822657 467 5224
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 177942068 177942506 438 15267
CTCF CD4SISSRdata 177942068 177942506 438 15267
CTCF G2GSE9613 177941973 177942466 493 15199
NFkBII GM12878GSE19485 177944886 177946571 1685 18708
NFkBII GM12892GSE19485 177945055 177946508 1453 18761
Oct1 H2O2-HelaGSE14283 177942937 177943002 65 15949
Oct1 HelaGSE14283 177942967 177943003 36 15965
hScc1 BcellGSE12603 177941898 177942466 568 15162
hScc1 CdLSGSE12603 177941898 177942622 724 15240
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FoxA1 MCF7MACSdata 177835404 177835736 332 0
Nanog hESGSE18292 177881897 177882109 212 0
Oct1 HelaGSE14283 177854005 177854092 87 0
Oct1 HelaGSE14283 177903053 177903148 95 0
Oct1 HelaGSE14283 177907516 177907595 79 0
Oct1 HelaGSE14283 177908119 177908171 52 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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