AutismKB 2.0

Annotation Detail for IL28RA


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Basic Information Top
Gene Symbol:IL28RA ( CRF2/12,IFNLR,IFNLR1,IL-28R1,LICR2 )
Gene Full Name: interleukin 28 receptor, alpha (interferon, lambda receptor)
Band: 1p36.11
Quick LinksEntrez ID:163702; OMIM: 607404; Uniprot ID:I28RA_HUMAN; ENSEMBL ID: ENSG00000185436; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
29N-linked (GlcNAc...).
36N-linked (GlcNAc...).
142N-linked (GlcNAc...).
169N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
29N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
36N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
142N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
169N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
29N-linkedHMM predict
62Phosphoserine(CDC2)HMM predict
102Phosphothreonine(PKC)HMM predict
104Phosphoserine(CDK)HMM predict
104Phosphoserine(CDC2)HMM predict
104Phosphoserine(CAMK2)HMM predict
119SulfotyrosineHMM predict
142N-linkedHMM predict
169N-linkedHMM predict
270Phosphoserine(ATM)HMM predict
286Phosphoserine(IKK)HMM predict
305O-linkedHMM predict
334Phosphothreonine(CK2)HMM predict
343Phosphotyrosine(Syk)HMM predict
389Phosphoserine(IKK)HMM predict
406Phosphotyrosine(Syk)HMM predict
431Phosphoserine(CK1)HMM predict
444N-linkedHMM predict
448C-linkedHMM predict
489Phosphoserine(CK2)HMM predict
489Phosphoserine(PKG)HMM predict
513Phosphothreonine(PKC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_170743
  • Location:chr1 24353234-24386337
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 24398358 24398718 360 12201
CTCF CD4GSE12889 24401004 24401292 288 14811
CTCF CD4SISSRdata 24398358 24398718 360 12201
CTCF CD4SISSRdata 24401004 24401292 288 14811
CTCF G2GSE9613 24386174 24386554 380 27
CTCF G2GSE9613 24394805 24395282 477 8706
CTCF G2GSE9613 24398340 24398766 426 12216
CTCF G2GSE9613 24401009 24401465 456 14900
FoxA1 MCF7MACSdata 24402378 24402748 370 16226
KLF4 hESGSE17917 24386343 24386572 229 120
NRSF JurkatGSE13047 24396776 24397227 451 10664
NRSF-mono JurkatQuESTdata 24396786 24397107 321 10609
NRSF-poly JurkatQuESTdata 24396776 24397227 451 10664
P300 T30-glioblastomaGSE21026 24390738 24391522 784 4793
STAT1 IFNSISSRdata 24400860 24401646 786 14916
Stat6 IL-4-hr1GSE17850 24398288 24398845 557 12229
TFAP2C MCF7GSE21234 24401009 24401700 691 15017
TFAP2C MCF7GSE21234 24402382 24402929 547 16318
USF1 HepG2E 24391738 24392255 517 5659
USF2 HepG2E 24391738 24392255 517 5659
hScc1 BcellGSE12603 24388657 24388833 176 2408
hScc1 BcellGSE12603 24398340 24398766 426 12216
hScc1 BcellGSE12603 24401009 24401382 373 14858
hScc1 BcellGSE12603 24402040 24402402 362 15884
hScc1 CdLSGSE12603 24388657 24388978 321 2480
hScc1 CdLSGSE12603 24398340 24398766 426 12216
hScc1 CdLSGSE12603 24401009 24401660 651 14997
hScc1 G2GSE9613 24398340 24398766 426 12216
p63 keratinocytesGSE17611 24394590 24395697 1107 8806
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 24349631 24349849 218 3495
CTCF CD4SISSRdata 24349631 24349849 218 3495
CTCF G2GSE9613 24349208 24349834 626 3714
Fos K562GSE19551 24348893 24349966 1073 3805
hScc1 BcellGSE12603 24349173 24349834 661 3731
hScc1 CdLSGSE12603 24349283 24349834 551 3676
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NFkBII GM10847GSE19485 24353796 24354998 1202 0
NFkBII GM12878GSE19485 24353672 24354904 1232 0
NFkBII GM12892GSE19485 24353806 24354963 1157 0
Nanog hESGSE18292 24353245 24353730 485 0
TFAP2C MCF7GSE21234 24384794 24385876 1082 0
hScc1 BcellGSE12603 24354022 24354432 410 0
hScc1 BcellGSE12603 24379412 24379699 287 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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