AutismKB 2.0

Annotation Detail for C1orf177


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Basic Information Top
Gene Symbol:C1orf177 ( FLJ40201 )
Gene Full Name: chromosome 1 open reading frame 177
Band: 1p32.3
Quick LinksEntrez ID:163747; OMIM: NA; Uniprot ID:CA177_HUMAN; ENSEMBL ID: ENSG00000162398; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_152607
  • Location:chr1 55044323-55080510
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF JurkatGSE13047 55041931 55042530 599 2093
NRSF-mono JurkatQuESTdata 55041956 55042483 527 2104
NRSF-poly JurkatQuESTdata 55041931 55042455 524 2131
Oct1 H2O2-HelaGSE14283 55042640 55042709 69 1649
Oct1 HelaGSE14283 55042632 55042711 79 1652
RNAII Tamoxifen-MCF7GSE14664 55042084 55042149 65 2207
RNAII Tamoxifen-MCF7GSE14664 55042236 55042270 34 2071
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 55048723 55049098 375 0
CTCF CD4SISSRdata 55048723 55049098 375 0
CTCF JurkatGSE12889 55048748 55049003 255 0
CTCF G2GSE9613 55046640 55047088 448 0
CTCF G2GSE9613 55048430 55049761 1331 0
CTCF G2GSE9613 55052535 55052930 395 0
Nanog hESGSE18292 55051830 55052447 617 0
Oct1 H2O2-HelaGSE14283 55064550 55064591 41 0
Oct1 H2O2-HelaGSE14283 55076021 55076075 54 0
Oct1 HelaGSE14283 55064550 55064589 39 0
Oct1 HelaGSE14283 55080015 55080055 40 0
TFAP2C MCF7GSE21234 55045540 55046014 474 0
TFAP2C MCF7GSE21234 55047053 55047458 405 0
TFAP2C MCF7GSE21234 55056814 55057203 389 0
hScc1 BcellGSE12603 55048266 55049682 1416 0
hScc1 BcellGSE12603 55052602 55053274 672 0
hScc1 BcellGSE12603 55055166 55055849 683 0
hScc1 CdLSGSE12603 55048430 55049241 811 0
hScc1 G2GSE9613 55048430 55049644 1214 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
828 mRNA FLJ40201 chr1 54983756 55019944 5702 EST chr1 55014242 55029939 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018