Annotation Detail for DDB2
Basic Information Top
| Gene Symbol: | DDB2 ( DDBB,FLJ34321,UV-DDB2 ) |
|---|---|
| Gene Full Name: | damage-specific DNA binding protein 2, 48kDa |
| Band: | 11p11.2 |
| Quick Links | Entrez ID:1643; OMIM: 600811; Uniprot ID:DDB2_HUMAN; ENSEMBL ID: ENSG00000134574; HGNC ID: 2718 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 24 | Phosphoserine. | |
| 26 | Phosphoserine. | |
| 274 | DWD box. | |
| 278 | N6-acetyllysine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 24 | Phosphoserine. | Swiss-Prot 53.0 |
| 24 | Phosphoserine | Phospho.ELM 6.0 |
| 26 | Phosphoserine. | Swiss-Prot 53.0 |
| 26 | Phosphoserine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 24 | Phosphoserine(PKG) | HMM predict |
| 26 | Phosphoserine(CDC2) | HMM predict |
| 26 | Phosphoserine(IKK) | HMM predict |
| 115 | Phosphothreonine(PKA) | HMM predict |
| 122 | Phosphothreonine(CDK) | HMM predict |
| 246 | Phosphothreonine(PKA) | HMM predict |
| 305 | Phosphothreonine(PKC) | HMM predict |
| 392 | Phosphoserine(CK1) | HMM predict |
| 413 | Tyrosine | HMM predict |
- RefSeq ID: NM_000107
- Location:chr11 47193088-47217338
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FOXA1 | MCF7 | GSE15244 | 47182419 | 47182876 | 457 | 10441 |
| FoxA1 | MCF7 | MACSdata | 47182396 | 47182614 | 218 | 10584 |
| Oct1 | Hela | GSE14283 | 47179765 | 47179811 | 46 | 13301 |
| RARA | MCF7 | GSE15244 | 47182419 | 47182876 | 457 | 10441 |
| RARG | MCF7 | GSE15244 | 47191010 | 47191318 | 308 | 1925 |
| TAF | Hela | GSE8489 | 47192333 | 47192595 | 262 | 625 |
| TFAP2C | MCF7 | GSE21234 | 47190823 | 47191585 | 762 | 1885 |
| USF1 | HepG2 | E | 47192333 | 47192595 | 262 | 625 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 47212188 | 47212332 | 144 | 0 |
| CTCF | CD4 | SISSRdata | 47212188 | 47212332 | 144 | 0 |
| FOXA1 | DLD1 | GSE12801 | 47212433 | 47213118 | 685 | 0 |
| FOXA1 | MCF7 | GSE15244 | 47192990 | 47193848 | 858 | 0 |
| FOXA1 | MCF7 | GSE15244 | 47194445 | 47195193 | 748 | 0 |
| FOXA1 | MCF7 | GSE15244 | 47212245 | 47213278 | 1033 | 0 |
| H3K4me3 | colorectal | cancer | 47193391 | 47194225 | 834 | 0 |
| H3ac | HepG2 | E | 47193067 | 47195193 | 2126 | 0 |
| H3ac | HepG2 | E | 47196115 | 47196987 | 872 | 0 |
| LIN9 | G0 | GSE7516 | 47192990 | 47193779 | 789 | 0 |
| LIN9 | S | GSE7516 | 47192954 | 47193742 | 788 | 0 |
| PolII | HeLa | GSE12783 | 47191983 | 47195327 | 3344 | 0 |
| RARA | MCF7 | GSE15244 | 47193255 | 47193881 | 626 | 0 |
| RARA | MCF7 | GSE15244 | 47194410 | 47195056 | 646 | 0 |
| RARG | MCF7 | GSE15244 | 47193255 | 47193917 | 662 | 0 |
| RARG | MCF7 | GSE15244 | 47194445 | 47195127 | 682 | 0 |
| Rb | Quiescent | GSE19898 | 47193003 | 47193713 | 710 | 0 |
| Rb | Senescent | GSE19898 | 47192915 | 47193603 | 688 | 0 |
| Rb | shRbSenescence | GSE19898 | 47192906 | 47193327 | 421 | 0 |
| TAF | Hela | GSE8489 | 47192918 | 47194305 | 1387 | 0 |
| USF1 | HepG2 | E | 47192918 | 47194225 | 1307 | 0 |
| p130 | Quiescent | GSE19898 | 47193013 | 47193709 | 696 | 0 |
| p130 | Senescent | GSE19898 | 47192923 | 47193622 | 699 | 0 |
| p130 | shRbQuiescent | GSE19898 | 47192731 | 47193625 | 894 | 0 |
| p130 | shRbSenescent | GSE19898 | 47192904 | 47193668 | 764 | 0 |
| p130 | G0 | GSE7516 | 47193102 | 47193848 | 746 | 0 |
| p130 | S | GSE7516 | 47193067 | 47193707 | 640 | 0 |
Validated miRNA targets