AutismKB 2.0

Annotation Detail for LRRN4


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:LRRN4 ( C20orf75,FLJ23994,MGC25027,NLRR4,dJ1056H1.1 )
Gene Full Name: leucine rich repeat neuronal 4
Band: 20p12.3
Quick LinksEntrez ID:164312; OMIM: NA; Uniprot ID:LRRN4_HUMAN; ENSEMBL ID: ENSG00000125872; HGNC ID: 16208
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
42N-linked (GlcNAc...) (Potential).
176N-linked (GlcNAc...) (Potential).
289N-linked (GlcNAc...) (Potential).
379N-linked (GlcNAc...) (Potential).
442N-linked (GlcNAc...) (Potential).
622N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_152611
  • Location:chr20 5969424-5982675
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 5986989 5987941 952 4790
FOXA1 eGFPGSE10845 5986989 5987941 952 4790
KLF4 hESGSE17917 5989997 5990157 160 7402
STAT1 HeLaGSE12783 5982514 5983586 1072 375
TFAP2C MCF7GSE21234 5987211 5987725 514 4793
VDR GM10855-stimGSE22484 5983378 5984651 1273 1339
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 5981041 5981344 303 0
Oct4 hESGSE17917 5969691 5969937 246 0
Rb GrowingGSE19898 5980454 5980648 194 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018