AutismKB 2.0

Annotation Detail for XIRP1


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Basic Information Top
Gene Symbol:XIRP1 ( CMYA1,DKFZp451D042,DKFZp779C1255,DKFZp779C1947,Xin )
Gene Full Name: xin actin-binding repeat containing 1
Band: 3p22.2
Quick LinksEntrez ID:165904; OMIM: 609777; Uniprot ID:XIRP1_HUMAN; ENSEMBL ID: ENSG00000168334; HGNC ID: 14301
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_194293
  • Location:chr3 39199710-39209080
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 39225068 39225231 163 16069
CTCF CD4SISSRdata 39225068 39225231 163 16069
CTCF G2GSE9613 39218744 39218956 212 9770
CTCF G2GSE9613 39220211 39220549 338 11300
NFkBII GM12892GSE19485 39222516 39223567 1051 13961
Nanog ESGSE20650 39227825 39228319 494 18992
STAT1 HeLaGSE12782 39211649 39213454 1805 3471
STAT1 HeLaGSE12783 39211722 39213704 1982 3633
hScc1 BcellGSE12603 39222341 39222880 539 13530
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 39195105 39195484 379 4416
CTCF G2GSE9613 39197009 39197654 645 2379
CTCF G2GSE9613 39199176 39199399 223 423
FOXA1 MCF7GSE15244 39196513 39197291 778 2809
H3ac HepG2E 39195105 39196137 1032 4090
PolII HeLaGSE12783 39193411 39198017 4606 3997
RARA MCF7GSE15244 39196513 39197117 604 2896
TFAP2C MCF7GSE21234 39189220 39189473 253 10364
TFAP2C MCF7GSE21234 39191189 39191750 561 8241
hScc1 BcellGSE12603 39197227 39197738 511 2228
hScc1 CdLSGSE12603 39197357 39197701 344 2182
hScc1 G2GSE9613 39196932 39197511 579 2489
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 39206306 39206628 322 0
CTCF CD4SISSRdata 39206306 39206628 322 0
CTCF G2GSE9613 39200225 39200590 365 0
CTCF G2GSE9613 39201181 39201481 300 0
CTCF G2GSE9613 39205011 39206582 1571 0
CTCF G2GSE9613 39207284 39207663 379 0
FOXA1 MCF7GSE15244 39206248 39206683 435 0
FoxA1 MCF7MACSdata 39206392 39206572 180 0
hScc1 BcellGSE12603 39201933 39202574 641 0
hScc1 BcellGSE12603 39205516 39207184 1668 0
hScc1 CdLSGSE12603 39205915 39207043 1128 0
hScc1 G2GSE9613 39206100 39206800 700 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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