Annotation Detail for COCH
Basic Information Top
| Gene Symbol: | COCH ( COCH-5B2,COCH5B2,DFNA9 ) |
|---|---|
| Gene Full Name: | coagulation factor C homolog, cochlin (Limulus polyphemus) |
| Band: | 14q12 |
| Quick Links | Entrez ID:1690; OMIM: 603196; Uniprot ID:COCH_HUMAN; ENSEMBL ID: ENSG00000100473; HGNC ID: 2180 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 100 | N-linked (GlcNAc...) (Potential). | |
| 221 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 100 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 221 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 24 | O-linked | HMM predict |
| 60 | Phosphoserine(CK1) | HMM predict |
| 62 | Phosphotyrosine(INSR) | HMM predict |
| 100 | N-linked | HMM predict |
| 101 | Phosphotyrosine(INSR) | HMM predict |
| 101 | Phosphotyrosine(Syk) | HMM predict |
| 129 | Phosphoserine(PKG) | HMM predict |
| 130 | Phosphothreonine(PKC) | HMM predict |
| 139 | O-linked | HMM predict |
| 152 | Phosphothreonine(CDC2) | HMM predict |
| 221 | N-linked | HMM predict |
| 377 | Phosphoserine(ATM) | HMM predict |
| 424 | Phosphotyrosine(INSR) | HMM predict |
| 464 | Phosphoserine(CDC2) | HMM predict |
| 479 | Phosphotyrosine(Syk) | HMM predict |
- RefSeq ID: NM_004086
- Location:chr14 30413515-30429572
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 30413174 | 30413427 | 253 | 215 |
| STAT1 | IFN | SISSRdata | 30400926 | 30401448 | 522 | 12329 |
| hScc1 | CdLS | GSE12603 | 30413028 | 30413861 | 833 | 71 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K27me3 | colorectal | cancer | 30414309 | 30415308 | 999 | 0 |
| Oct1 | Hela | GSE14283 | 30418541 | 30418596 | 55 | 0 |
| Oct1 | Hela | GSE14283 | 30418920 | 30418967 | 47 | 0 |
| hScc1 | Bcell | GSE12603 | 30413247 | 30414281 | 1034 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7758 | mRNA | COCH | chr14 | 30413528 | 30434010 | 141 | mRNA | STRN3 | chr14 | 30432760 | 30565340 | Sense/Antisense (SA) pairs |