AutismKB 2.0

Annotation Detail for EBF1


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Basic Information Top
Gene Symbol:EBF1 ( COE1,EBF,FLJ39389,FLJ41763,O/E-1,OLF1 )
Gene Full Name: early B-cell factor 1
Band: 5q33.3
Quick LinksEntrez ID:1879; OMIM: 164343; Uniprot ID:COE1_HUMAN; ENSEMBL ID: ENSG00000164330; HGNC ID: 3126
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
101Phosphoserine(CK1)HMM predict
127Phosphotyrosine(EGFR)HMM predict
164S-palmitoylHMM predict
165S-palmitoylHMM predict
174N-linkedHMM predict
236N-linkedHMM predict
237N-linkedHMM predict
314Phosphothreonine(CDC2)HMM predict
314Phosphothreonine(CDK)HMM predict
354SulfotyrosineHMM predict
390Phosphotyrosine(Abl)HMM predict
412Phosphotyrosine(SRC)HMM predict
426N-linkedHMM predict
446N-linkedHMM predict
448O-linkedHMM predict
461N-linkedHMM predict
464Phosphoserine(ATM)HMM predict
464O-linkedHMM predict
473O-linkedHMM predict
475Phosphothreonine(CDK)HMM predict
475Phosphothreonine(MAPK)HMM predict
479O-linkedHMM predict
485O-linkedHMM predict
491Phosphotyrosine(INSR)HMM predict
502Phosphoserine(CDC2)HMM predict
507N-linkedHMM predict
512N-linkedHMM predict
521Phosphoserine(CDK)HMM predict
523O-linkedHMM predict
529Phosphoserine(CK1)HMM predict
529Phosphoserine(IKK)HMM predict
532O-linkedHMM predict
532Phosphoserine(IKK)HMM predict
533N-linkedHMM predict
536Phosphoserine(CK1)HMM predict
536Phosphoserine(CDC2)HMM predict
566Phosphothreonine(PKC)HMM predict
567O-linkedHMM predict
571O-linkedHMM predict
573O-linkedHMM predict
573O-linkedHMM predict
574Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_024007
  • Location:chr5 158058005-158459346
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 158466401 158466792 391 7250
CTCF CD4SISSRdata 158466401 158466792 391 7250
CTCF HelaGSE12889 158466487 158466708 221 7251
CTCF JurkatGSE12889 158466498 158466798 300 7302
CTCF G2GSE9613 158460321 158460528 207 1078
CTCF G2GSE9613 158466147 158466969 822 7212
H3K27me3 colorectalcancer 158460612 158463937 3325 2928
H3K27me3 colorectalcancer 158464339 158466395 2056 6021
Myc K562GSE19551 158466491 158466671 180 7235
NFkBII GM12892GSE19485 158458433 158460796 2363 268
Pol2 GM12878GSE19551 158459664 158460450 786 711
Rb QuiescentGSE19898 158460022 158460206 184 768
hScc1 BcellGSE12603 158465966 158466969 1003 7121
hScc1 CdLSGSE12603 158459657 158460648 991 806
hScc1 CdLSGSE12603 158465999 158466969 970 7138
hScc1 G2GSE9613 158466147 158466969 822 7212
p130 SenescentGSE19898 158459893 158460151 258 676
p130 shRbSenescentGSE19898 158459913 158460405 492 813
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 158055112 158055490 378 2705
CTCF CD4SISSRdata 158055112 158055490 378 2705
CTCF G2GSE9613 158055156 158055633 477 2611
Myc K562GSE19551 158055080 158055427 347 2752
Myc hESGSE17917 158055323 158055557 234 2566
USF1 HepG2E 158040123 158040336 213 17776
hScc1 BcellGSE12603 158054931 158055670 739 2705
hScc1 CdLSGSE12603 158054895 158055898 1003 2609
hScc1 G2GSE9613 158055045 158055670 625 2648
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 158302357 158303094 737 0
CTCF JurkatGSE12889 158130180 158130331 151 0
CTCF G2GSE9613 158067440 158067577 137 0
CTCF G2GSE9613 158071676 158072061 385 0
CTCF G2GSE9613 158130043 158130342 299 0
CTCF G2GSE9613 158268487 158268636 149 0
CTCF G2GSE9613 158374863 158375302 439 0
CTCF G2GSE9613 158455523 158456331 808 0
CTCF G2GSE9613 158458581 158459005 424 0
FOXA1 MCF7GSE15244 158214878 158215607 729 0
Fos K562GSE19551 158302673 158302971 298 0
H3K27me3 colorectalcancer 158456858 158458084 1226 0
KLF4 hESGSE17917 158300334 158300493 159 0
KLF4 hESGSE17917 158435162 158435489 327 0
Myc K562GSE19551 158454375 158454785 410 0
NFkBII GM12878GSE19485 158312085 158314833 2748 0
NRSF JurkatGSE13047 158076040 158076815 775 0
NRSF JurkatSISSRdata 158076219 158076685 466 0
NRSF mAbJurkat 158071532 158080030 8498 0
NRSF mAbJurkat 158080503 158082639 2136 0
NRSF mAbJurkat 158348419 158349665 1246 0
NRSF-mono JurkatQuESTdata 158076141 158076672 531 0
NRSF-mono JurkatQuESTdata 158348533 158348910 377 0
NRSF pAbJurkat 158076116 158076498 382 0
NRSF-poly JurkatQuESTdata 158076051 158076664 613 0
NRSF-poly JurkatQuESTdata 158348539 158348952 413 0
Nanog hESGSE18292 158183769 158184241 472 0
Nanog hESGSE18292 158247474 158247754 280 0
Nanog hESGSE18292 158317627 158318048 421 0
Nanog hESGSE18292 158377293 158377664 371 0
Nanog hESGSE18292 158442166 158442401 235 0
Oct4 ESGSE20650 158317601 158317970 369 0
Oct4 hESGSE17917 158082484 158082912 428 0
Oct4 hESGSE17917 158300331 158300483 152 0
Oct4 hESGSE21916 158082454 158083031 577 0
Oct4 hESGSE21916 158228554 158229230 676 0
P300 T0-glioblastomaGSE21026 158398010 158399166 1156 0
P300 T30-glioblastomaGSE21026 158060201 158061773 1572 0
P300 T30-glioblastomaGSE21026 158302442 158303149 707 0
Rb QuiescentGSE19898 158119773 158119899 126 0
Sox2 hESGSE18292 158228676 158229127 451 0
Sox2 hESGSE18292 158377209 158377575 366 0
Stat6 IL-4-hr1GSE17850 158439378 158439955 577 0
VDR GM10855-stimGSE22484 158207555 158209149 1594 0
VDR GM10855-stimGSE22484 158209185 158210679 1494 0
hScc1 BcellGSE12603 158129969 158130379 410 0
hScc1 BcellGSE12603 158313666 158314016 350 0
hScc1 BcellGSE12603 158409393 158410245 852 0
hScc1 BcellGSE12603 158410801 158411538 737 0
hScc1 BcellGSE12603 158454755 158455062 307 0
hScc1 BcellGSE12603 158456578 158457718 1140 0
hScc1 BcellGSE12603 158458674 158459061 387 0
hScc1 CdLSGSE12603 158239883 158240611 728 0
hScc1 CdLSGSE12603 158409275 158409897 622 0
p130 QuiescentGSE19898 158458532 158458739 207 0
p130 SenescentGSE19898 158301705 158302007 302 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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