Annotation Detail for AHR


Gene Symbol: | AHR ( bHLHe76 ) |
---|---|
Gene Full Name: | aryl hydrocarbon receptor |
Band: | 7p21.1 |
Quick Links | Entrez ID:196; OMIM: 600253; Uniprot ID:AHR_HUMAN; ENSEMBL ID: ENSG00000106546; HGNC ID: 348 |
Relate to Another Database: | SFARIGene; denovo-db |
No data |
No data |
Location(AA) | Modification | Resource |
---|---|---|
7 | N-linked | HMM predict |
34 | N-linked | HMM predict |
90 | Phosphoserine(CDC2) | HMM predict |
179 | N-linked | HMM predict |
222 | S-palmitoyl | HMM predict |
230 | N-linked | HMM predict |
433 | N-linked | HMM predict |
440 | Phosphoserine(PKG) | HMM predict |
440 | Phosphoserine(IKK) | HMM predict |
440 | O-linked | HMM predict |
445 | O-linked | HMM predict |
468 | Phosphotyrosine(Syk) | HMM predict |
473 | O-linked | HMM predict |
474 | O-linked | HMM predict |
475 | O-linked | HMM predict |
476 | Phosphoserine(CK1) | HMM predict |
476 | Phosphoserine(IKK) | HMM predict |
478 | O-linked | HMM predict |
487 | N-linked | HMM predict |
491 | N-linked | HMM predict |
505 | N-linked | HMM predict |
592 | Phosphoserine(CDC2) | HMM predict |
608 | N-linked | HMM predict |
672 | Phosphotyrosine(Syk) | HMM predict |
727 | O-linked | HMM predict |
727 | Phosphoserine(CDC2) | HMM predict |
731 | O-linked | HMM predict |
731 | Phosphothreonine(PKC) | HMM predict |
808 | N-linked | HMM predict |
819 | N-linked | HMM predict |
820 | N-linked | HMM predict |
- RefSeq ID: NM_001621
- Location:chr7 17304831-17352296
- strand:+
Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
---|---|---|---|---|---|---|
H3K4me2 | HCT116 | GSE10453 | 17303560 | 17304314 | 754 | 895 |
USF1 | HepG2 | E | 17303100 | 17304656 | 1556 | 954 |
USF2 | HepG2 | E | 17304026 | 17304612 | 586 | 513 |
No data |
Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
---|---|---|---|---|---|---|
CTCF | G2 | GSE9613 | 17304845 | 17305473 | 628 | 0 |
H3K4me2 | HCT116 | GSE10453 | 17305814 | 17306493 | 679 | 0 |
H3K4me3 | colorectal | cancer | 17305557 | 17306408 | 851 | 0 |
H3ac | HepG2 | E | 17305510 | 17306989 | 1479 | 0 |
Nanog | ES | GSE20650 | 17346825 | 17347293 | 468 | 0 |
Nanog | hES | GSE18292 | 17346769 | 17347190 | 421 | 0 |
Oct1 | Hela | GSE14283 | 17313930 | 17313960 | 30 | 0 |
Oct4 | hES | GSE21916 | 17318801 | 17319235 | 434 | 0 |
PHF8 | HeLa | GSE20725 | 17304343 | 17305965 | 1622 | 0 |
TAF | Hela | GSE8489 | 17305557 | 17306232 | 675 | 0 |
hScc1 | Bcell | GSE12603 | 17304612 | 17305404 | 792 | 0 |
hScc1 | Bcell | GSE12603 | 17308751 | 17309241 | 490 | 0 |
hScc1 | CdLS | GSE12603 | 17308825 | 17309267 | 442 | 0 |
Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
---|---|---|---|
hsa-miR-1 | hsa-mir-1-2 | 18 | 15685193 |
hsa-miR-1 | hsa-mir-1-1 | 20 | 15685193 |
hsa-miR-124 | hsa-mir-124-1 | 8 | 15685193 |
hsa-miR-124 | hsa-mir-124-2 | 8 | 15685193 |
hsa-miR-124 | hsa-mir-124-3 | 20 | 15685193 |
hsa-miR-373 | hsa-mir-373 | 19 | 15685193 |
hsa-miR-373* | hsa-mir-373 | 19 | 15685193 |
ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
---|---|---|---|---|---|---|
309 | Unknown | MicroArray | miR-124 | AHR | n_a | 15685193 |
407 | Unknown | FALSE | miR-124 | Ahr | immunoblotting | 15806104 |
688 | Unknown | FALSE | miR-375 | Ahr | immunoblotting | 15806104 |
Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
ENSG00000106546 | G1-to-S transition | n_a | n_a | "epithelium, squamous cell, lymphoblast, lymphocyte, muscle cell" | "benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma" | |
ENSG00000106546 | G1-to-S transition | n_a | n_a | n_a | n_a | |
ENSG00000106546 | n_a | n_a | n_a | n_a | n_a |
Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
---|---|---|---|---|---|---|---|---|---|---|---|---|
23683 | mRNA | AHR | chr7 | 17111485 | 17158632 | 270 | EST | chr7 | 17099280 | 17112221 | Sense/Antisense (SA) pairs | |