AutismKB 2.0

Annotation Detail for WDR90


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Basic Information Top
Gene Symbol:WDR90 ( C16orf15,C16orf16,C16orf17,C16orf18,C16orf19,FLJ36483,FLJ44660,KIAA1924 )
Gene Full Name: WD repeat domain 90
Band: 16p13.3
Quick LinksEntrez ID:197335; OMIM: NA; Uniprot ID:WDR90_HUMAN; ENSEMBL ID: ENSG00000161996; HGNC ID: 26960
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
241Phosphoserine (By similarity).
854Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_145294
  • Location:chr16 639363-657829
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 638542 639936 1394 125
P300 T0-glioblastomaGSE21026 638721 639737 1016 135
P300 T30-glioblastomaGSE21026 638503 639886 1383 169
PHF8 HeLaGSE20725 638493 639916 1423 159
PHF8 Hs68plusFBSGSE20725 638467 640230 1763 15
Rb QuiescentGSE19898 639189 639507 318 16
Rb SenescentGSE19898 639139 639473 334 58
p130 QuiescentGSE19898 639138 639505 367 42
p130 SenescentGSE19898 639139 639490 351 49
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 651040 651144 104 0
CTCF CD4SISSRdata 651040 651144 104 0
CTCF G2GSE9613 642359 642879 520 0
CTCF G2GSE9613 643664 644155 491 0
CTCF G2GSE9613 645202 646043 841 0
CTCF G2GSE9613 647585 648617 1032 0
CTCF G2GSE9613 649038 651405 2367 0
CTCF G2GSE9613 652180 652363 183 0
CTCF G2GSE9613 656059 656400 341 0
ER MCF7GSE19013 641631 642209 578 0
FOXA1 MCF7GSE15244 653475 654152 677 0
H3K4me3 colorectalcancer 639169 639583 414 0
Rb SenescentGSE19898 650747 650928 181 0
Rb shRbQuiescentGSE19898 639307 639427 120 0
Rb shRbSenescenceGSE19898 639625 639872 247 0
TFAP2C MCF7GSE21234 650207 650609 402 0
hScc1 BcellGSE12603 641831 642556 725 0
hScc1 BcellGSE12603 647508 648441 933 0
hScc1 BcellGSE12603 650856 651519 663 0
p130 shRbSenescentGSE19898 639191 639662 471 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
9435 mRNA KIAA1924 chr16 639311 651076 784 HTC chr16 644992 646195Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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