AutismKB 2.0

Annotation Detail for ELF1


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Basic Information Top
Gene Symbol:ELF1 ( - )
Gene Full Name: E74-like factor 1 (ets domain transcription factor)
Band: 13q14.11
Quick LinksEntrez ID:1997; OMIM: 189973; Uniprot ID:ELF1_HUMAN; ENSEMBL ID: ENSG00000120690; HGNC ID: 3316
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
160Phosphotyrosine.
163Phosphoserine.
167Phosphoserine.
168Phosphoserine.
187Phosphoserine.
432Phosphoserine.
474Phosphoserine.
566Phosphothreonine.
Location(AA) Modifications Resource
168Phosphoserine.Swiss-Prot 53.0
168PhosphoserinePhospho.ELM 6.0
432Phosphoserine.Swiss-Prot 53.0
Location(AA) Modification Resource
110Phosphoserine(ATM)HMM predict
163Phosphoserine(CDC2)HMM predict
163Phosphoserine(ATM)HMM predict
168Phosphoserine(CDC2)HMM predict
168Phosphoserine(CDK)HMM predict
187Phosphoserine(CDC2)HMM predict
187Phosphoserine(IKK)HMM predict
261Phosphotyrosine(Syk)HMM predict
298SulfotyrosineHMM predict
298Phosphotyrosine(INSR)HMM predict
305Phosphoserine(CK1)HMM predict
306Phosphoserine(CK2)HMM predict
307Phosphoserine(CK1)HMM predict
310Phosphoserine(CK2)HMM predict
314Phosphoserine(IKK)HMM predict
314O-linkedHMM predict
314Phosphoserine(CK1)HMM predict
314O-linkedHMM predict
316Phosphoserine(CK1)HMM predict
318Phosphoserine(IKK)HMM predict
324N-linkedHMM predict
326Phosphothreonine(PKC)HMM predict
332Phosphoserine(PKG)HMM predict
333Phosphoserine(CK1)HMM predict
334Phosphoserine(ATM)HMM predict
334Phosphoserine(CDC2)HMM predict
374O-linkedHMM predict
374O-linkedHMM predict
376Phosphoserine(ATM)HMM predict
376Phosphoserine(CDC2)HMM predict
412N-linkedHMM predict
432Phosphoserine(CDC2)HMM predict
458O-linkedHMM predict
474Phosphoserine(ATM)HMM predict
493Phosphoserine(CDC2)HMM predict
517N-linkedHMM predict
519O-linkedHMM predict
521O-linkedHMM predict
524O-linkedHMM predict
525PhosphoserineHMM predict
525Phosphoserine(CDC2)HMM predict
525O-linkedHMM predict
527Phosphoserine(IKK)HMM predict
527O-linkedHMM predict
529O-linkedHMM predict
529O-linkedHMM predict
529O-linkedHMM predict
531O-linkedHMM predict
536O-linkedHMM predict
538O-linkedHMM predict
538Phosphoserine(CDC2)HMM predict
592Phosphotyrosine(Abl)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_172373
  • Location:chr13 40404164-40454417
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 40464800 40465158 358 10562
CTCF CD4SISSRdata 40464800 40465158 358 10562
ER MCF7GSE19013 40465775 40466513 738 11727
FoxA1 MCF7MACSdata 40466010 40466237 227 11706
RARA MCF7GSE15244 40465971 40466471 500 11804
RARG MCF7GSE15244 40465971 40466471 500 11804
USF2 HepG2E 40473766 40474196 430 19564
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 40393766 40393948 182 10308
CTCF CD4SISSRdata 40393766 40393948 182 10308
CTCF G2GSE9613 40393520 40394090 570 10360
ETS1 JurkatGSE17954 40393293 40394455 1162 10291
H3K4me3 colorectalcancer 40392912 40393832 920 10793
H3ac HepG2E 40392311 40392983 672 11518
PHF8 293TGSE20725 40393450 40394596 1146 10142
PHF8 Hs68minusFBSGSE20725 40393306 40394388 1082 10318
PHF8 Hs68plusFBSGSE20725 40393432 40394476 1044 10211
RARA MCF7GSE15244 40393238 40393728 490 10682
RARG MCF7GSE15244 40393206 40393870 664 10627
Rb SenescentGSE19898 40393811 40394205 394 10157
TFAP2C MCF7GSE21234 40394004 40394313 309 10006
hScc1 BcellGSE12603 40393282 40394202 920 10423
hScc1 CdLSGSE12603 40393344 40393976 632 10505
p130 QuiescentGSE19898 40393508 40393702 194 10560
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 40446858 40447133 275 0
CTCF CD4SISSRdata 40446858 40447133 275 0
Fos K562GSE19551 40436046 40436464 418 0
Gata2 K562GSE18868 40446669 40447106 437 0
Myc K562GSE19551 40446877 40447122 245 0
Oct1 HelaGSE14283 40454189 40454229 40 0
Oct1 HelaGSE14283 40454314 40454348 34 0
RARG MCF7GSE15244 40434861 40435112 251 0
TAF k562GSE8489 40453778 40454711 933 0
hScc1 BcellGSE12603 40446773 40447191 418 0
hScc1 CdLSGSE12603 40446741 40447191 450 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
7108 mRNA chr13 40404167 40404761 594 mRNA ELF1 chr13 40404164 40454418Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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