Annotation Detail for GKN2

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Basic Information Top

Gene Symbol:	GKN2 ( GDDR,PRO813,TFIZ1,VLTI465 )
Gene Full Name:	gastrokine 2
Band:	2p13.3
Quick Links	Entrez ID:200504; OMIM: NA; Uniprot ID:GKN2_HUMAN; ENSEMBL ID: ENSG00000183607; HGNC ID: 24588
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:0 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:5 results

No data

Location(AA)	Modification	Resource
21	Phosphotyrosine(INSR)	HMM predict
21	Phosphotyrosine(Jak)	HMM predict
21	Phosphotyrosine(Syk)	HMM predict
57	O-linked	HMM predict
61	O-linked	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_182536
Location:chr2 69025868-69033605
strand:-

Upstream the gene:0 results
Downstream the gene:15 results
Inside the gene:1 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	69005948	69006313	365	19738
CTCF	CD4	GSE12889	69024214	69024497	283	1513
CTCF	CD4	SISSRdata	69005948	69006313	365	19738
CTCF	CD4	SISSRdata	69024214	69024497	283	1513
CTCF	G2	GSE9613	69005822	69006366	544	19775
CTCF	G2	GSE9613	69016265	69016674	409	9399
Myc	K562	GSE19551	69005890	69006217	327	19815
P300	T30-glioblastoma	GSE21026	69016668	69017733	1065	8668
hScc1	Bcell	GSE12603	69005822	69006779	957	19568
hScc1	CdLS	GSE12603	69005786	69006514	728	19719
hScc1	G2	GSE9613	69005642	69006442	800	19827
p130	Quiescent	GSE19898	69024198	69024590	392	1475
p130	Senescent	GSE19898	69024395	69024732	337	1305
p130	shRbQuiescent	GSE19898	69024281	69024741	460	1358
p130	shRbSenescent	GSE19898	69024149	69024652	503	1468

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Nanog	hES	GSE18292	69032385	69032917	532	0

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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