AutismKB 2.0

Annotation Detail for C17orf108


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Basic Information Top
Gene Symbol:C17orf108 ( - )
Gene Full Name: chromosome 17 open reading frame 108
Band: 17q11.2
Quick LinksEntrez ID:201229; OMIM: NA; Uniprot ID:CQ108_HUMAN; ENSEMBL ID: ENSG00000232859; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001076680
  • Location:chr17 23229467-23244535
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 23259239 23259273 34 14721
Oct1 HelaGSE14283 23259239 23259273 34 14721
Oct1 HelaGSE14283 23262156 23262234 78 17660
STAT1 HeLaGSE12782 23258906 23260235 1329 15035
STAT1 HeLaGSE12783 23258994 23260235 1241 15079
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 23224634 23225426 792 4438
FOXA1 MCF7GSE15244 23224771 23225498 727 4333
RARA MCF7GSE15244 23213404 23213892 488 15820
RARA MCF7GSE15244 23224771 23225719 948 4223
RARG MCF7GSE15244 23224771 23225832 1061 4166
TFAP2C MCF7GSE21234 23224744 23225309 565 4441
hScc1 BcellGSE12603 23221621 23221893 272 7711
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 23231246 23231446 200 0
CTCF CD4GSE12889 23244217 23244834 617 0
CTCF CD4SISSRdata 23231246 23231446 200 0
CTCF CD4SISSRdata 23244217 23244834 617 0
CTCF G2GSE9613 23231081 23231829 748 0
CTCF G2GSE9613 23244241 23244813 572 0
Myc K562GSE19551 23231176 23231609 433 0
NFkBII GM12892GSE19485 23239364 23240674 1310 0
PHF8 Hs68plusFBSGSE20725 23243745 23244895 1150 0
hScc1 BcellGSE12603 23230870 23231829 959 0
hScc1 BcellGSE12603 23243995 23244848 853 0
hScc1 CdLSGSE12603 23230832 23232086 1254 0
hScc1 CdLSGSE12603 23243995 23244813 818 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
10837 mRNA chr17 23225797 23232390 1260 mRNA LOC201229 chr17 23229512 23244512Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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