Annotation Detail for EMP3

View Evidences	View Variants	View Annotations

Basic Information Top

Gene Symbol:	EMP3 ( YMP )
Gene Full Name:	epithelial membrane protein 3
Band:	19q13.33
Quick Links	Entrez ID:2014; OMIM: 602335; Uniprot ID:EMP3_HUMAN; ENSEMBL ID: ENSG00000142227; HGNC ID: 3335
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:2 results
Experimental PTM Sites from dbPTM:2 results
Predicted PTM Sites by profile HMM from dbPTM:5 results

Location(AA)	Modification
47	N-linked (GlcNAc...) (Potential).
56	N-linked (GlcNAc...) (Potential).

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_001425
Location:chr19 53520453-53525621
strand:+

Upstream the gene:16 results
Downstream the gene:1 results
Inside the gene:8 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	53515145	53515476	331	5143
CTCF	CD4	SISSRdata	53515145	53515476	331	5143
CTCF	G2	GSE9613	53515069	53515323	254	5258
FoxA1	MCF7	MACSdata	53512326	53512569	243	8006
NFkBII	GM15510	GSE19485	53516249	53517758	1509	3450
Rb	Senescent	GSE19898	53516777	53517242	465	3444
TAF	Hela	GSE8489	53517407	53518214	807	2643
TAF	k562	GSE8489	53517447	53518214	767	2623
TAF	k562	GSE8489	53519289	53519507	218	1056
TFAP2C	MCF7	GSE21234	53516349	53517546	1197	3506
USF1	HepG2	E	53516943	53518185	1242	2890
USF2	HepG2	E	53517043	53518214	1171	2825
hScc1	Bcell	GSE12603	53513558	53514014	456	6668
hScc1	Bcell	GSE12603	53515069	53515360	291	5239
hScc1	CdLS	GSE12603	53515069	53515463	394	5188
p130	shRbQuiescent	GSE19898	53516518	53517155	637	3617

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
hScc1	Bcell	GSE12603	53525446	53525939	493	71

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ETS1	Jurkat	GSE17954	53524323	53526107	1784	0
Fos	K562	GSE19551	53520067	53521595	1528	0
FoxA1	MCF7	MACSdata	53525235	53525503	268	0
Oct1	Hela	GSE14283	53524791	53524820	29	0
Oct1	Hela	GSE14283	53525253	53525310	57	0
PHF8	Hs68plusFBS	GSE20725	53519932	53521442	1510	0
TFAP2C	MCF7	GSE21234	53520818	53521397	579	0
TFAP2C	MCF7	GSE21234	53524978	53525711	733	0

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved