AutismKB 2.0

Annotation Detail for TSNARE1


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Basic Information Top
Gene Symbol:TSNARE1 ( FLJ31164,MGC142116 )
Gene Full Name: t-SNARE domain containing 1
Band: 8q24.3
Quick LinksEntrez ID:203062; OMIM: NA; Uniprot ID:TSNA1_HUMAN; ENSEMBL ID: ENSG00000171045; HGNC ID: 26437
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
47Phosphoserine(CDK)HMM predict
47Phosphoserine(MAPK)HMM predict
47Phosphoserine(CDC2)HMM predict
50Phosphoserine(IKK)HMM predict
88O-linkedHMM predict
94O-linkedHMM predict
94O-linkedHMM predict
96Phosphoserine(CDC2)HMM predict
96O-linkedHMM predict
105Phosphoserine(IKK)HMM predict
105Phosphoserine(PKG)HMM predict
119Phosphothreonine(PKC)HMM predict
272N-linkedHMM predict
277Phosphoserine(CK1)HMM predict
297Phosphoserine(CK1)HMM predict
306N-linkedHMM predict
314O-linkedHMM predict
378Phosphoserine(CDK)HMM predict
378Phosphoserine(CDC2)HMM predict
394N-linkedHMM predict
398N-linkedHMM predict
412PhosphothreonineHMM predict
445Phosphoserine(MAPK)HMM predict
465Phosphoserine(CK2)HMM predict
496GlycineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_145003
  • Location:chr8 143291348-143482443
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 143482270 143483046 776 215
NRSF pAbJurkat 143495202 143495672 470 12994
P300 T0-glioblastomaGSE21026 143482284 143483013 729 205
P300 T30-glioblastomaGSE21026 143482258 143483126 868 249
PHF8 HeLaGSE20725 143482220 143483464 1244 399
PHF8 Hs68minusFBSGSE20725 143482230 143483022 792 183
PHF8 Hs68plusFBSGSE20725 143482285 143483164 879 281
hScc1 BcellGSE12603 143482041 143483240 1199 197
hScc1 BcellGSE12603 143494287 143494624 337 12012
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 143277413 143277773 360 13756
NRSF pAbJurkat 143273935 143274411 476 17176
NRSF pAbJurkat 143276028 143276401 373 15134
NRSF pAbJurkat 143283921 143284162 241 7307
NRSF pAbJurkat 143285062 143285360 298 6138
NRSF pAbJurkat 143289454 143290287 833 1478
hScc1 BcellGSE12603 143272689 143273324 635 18342
hScc1 BcellGSE12603 143284955 143285396 441 6173
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 143462604 143463062 458 0
CBP T30-glioblastomaGSE21026 143314209 143314929 720 0
ER MCF7GSE19013 143313878 143314743 865 0
ER MCF7GSE19013 143332677 143333316 639 0
ER MCF7GSE19013 143393303 143393660 357 0
ER MCF7GSE19013 143423708 143424312 604 0
FOXA1 DLD1GSE12801 143414296 143414642 346 0
FOXA1 MCF7GSE15244 143296670 143297859 1189 0
FOXA1 MCF7GSE15244 143361714 143363505 1791 0
FOXA1 MCF7GSE15244 143364029 143364300 271 0
FOXA1 MCF7GSE15244 143404851 143406001 1150 0
FOXA1 MCF7GSE15244 143469529 143470692 1163 0
FOXA1 MCF7GSE15244 143480440 143481750 1310 0
FoxA1 MCF7MACSdata 143468994 143469375 381 0
NRSF JurkatGSE13047 143296628 143297536 908 0
NRSF JurkatGSE13047 143329578 143330898 1320 0
NRSF JurkatGSE13047 143462372 143463487 1115 0
NRSF mAbJurkat 143296670 143297221 551 0
NRSF mAbJurkat 143462027 143463570 1543 0
NRSF-mono JurkatQuESTdata 143296633 143298000 1367 0
NRSF-mono JurkatQuESTdata 143329660 143330524 864 0
NRSF-mono JurkatQuESTdata 143462349 143463085 736 0
NRSF pAbJurkat 143290870 143291999 1129 0
NRSF pAbJurkat 143292966 143293861 895 0
NRSF pAbJurkat 143294668 143296197 1529 0
NRSF pAbJurkat 143296670 143298122 1452 0
NRSF pAbJurkat 143301308 143301635 327 0
NRSF pAbJurkat 143305922 143306876 954 0
NRSF pAbJurkat 143314025 143314513 488 0
NRSF pAbJurkat 143317211 143318525 1314 0
NRSF pAbJurkat 143325523 143326380 857 0
NRSF pAbJurkat 143327589 143327865 276 0
NRSF pAbJurkat 143330998 143332582 1584 0
NRSF pAbJurkat 143333402 143334126 724 0
NRSF pAbJurkat 143336088 143336394 306 0
NRSF pAbJurkat 143341081 143341361 280 0
NRSF pAbJurkat 143357001 143358009 1008 0
NRSF pAbJurkat 143364906 143365471 565 0
NRSF pAbJurkat 143370080 143370482 402 0
NRSF pAbJurkat 143371860 143373616 1756 0
NRSF pAbJurkat 143375973 143376568 595 0
NRSF pAbJurkat 143380058 143381169 1111 0
NRSF pAbJurkat 143385305 143385759 454 0
NRSF pAbJurkat 143397547 143398987 1440 0
NRSF pAbJurkat 143404530 143405646 1116 0
NRSF pAbJurkat 143410667 143411365 698 0
NRSF pAbJurkat 143412911 143413205 294 0
NRSF pAbJurkat 143417408 143418243 835 0
NRSF pAbJurkat 143419892 143421249 1357 0
NRSF pAbJurkat 143421777 143422364 587 0
NRSF pAbJurkat 143424459 143425085 626 0
NRSF pAbJurkat 143426757 143427275 518 0
NRSF pAbJurkat 143431692 143432634 942 0
NRSF pAbJurkat 143433163 143434239 1076 0
NRSF pAbJurkat 143438026 143440715 2689 0
NRSF pAbJurkat 143452126 143453249 1123 0
NRSF pAbJurkat 143456241 143456596 355 0
NRSF pAbJurkat 143458979 143459913 934 0
NRSF pAbJurkat 143460163 143461223 1060 0
NRSF pAbJurkat 143462300 143463570 1270 0
NRSF pAbJurkat 143472846 143473061 215 0
NRSF pAbJurkat 143474790 143475541 751 0
NRSF pAbJurkat 143476983 143477792 809 0
NRSF pAbJurkat 143480440 143480933 493 0
NRSF-poly JurkatQuESTdata 143296638 143297106 468 0
NRSF-poly JurkatQuESTdata 143329578 143330625 1047 0
NRSF-poly JurkatQuESTdata 143462372 143463157 785 0
P300 T30-glioblastomaGSE21026 143314151 143314893 742 0
RARA MCF7GSE15244 143296840 143297645 805 0
RARA MCF7GSE15244 143313431 143313886 455 0
RARA MCF7GSE15244 143469529 143470692 1163 0
RARG MCF7GSE15244 143296670 143297889 1219 0
RARG MCF7GSE15244 143391984 143392223 239 0
RARG MCF7GSE15244 143469529 143470692 1163 0
RARG MCF7GSE15244 143480843 143481497 654 0
TFAP2C MCF7GSE21234 143294826 143295408 582 0
TFAP2C MCF7GSE21234 143313597 143315570 1973 0
TFAP2C MCF7GSE21234 143372715 143373241 526 0
TFAP2C MCF7GSE21234 143381445 143382575 1130 0
TFAP2C MCF7GSE21234 143393226 143394514 1288 0
TFAP2C MCF7GSE21234 143412874 143413566 692 0
TFAP2C MCF7GSE21234 143423796 143424387 591 0
TFAP2C MCF7GSE21234 143434458 143435220 762 0
TFAP2C MCF7GSE21234 143454316 143455079 763 0
TFAP2C MCF7GSE21234 143468748 143469543 795 0
TFAP2C MCF7GSE21234 143471037 143471582 545 0
TFAP2C MCF7GSE21234 143472610 143473590 980 0
USF1 HepG2E 143296912 143297645 733 0
USF1 HepG2E 143480224 143481714 1490 0
hScc1 BcellGSE12603 143298910 143299700 790 0
hScc1 BcellGSE12603 143300261 143300780 519 0
hScc1 BcellGSE12603 143306166 143306656 490 0
hScc1 BcellGSE12603 143325734 143326380 646 0
hScc1 BcellGSE12603 143330853 143331955 1102 0
hScc1 BcellGSE12603 143352221 143352635 414 0
hScc1 BcellGSE12603 143359145 143359775 630 0
hScc1 BcellGSE12603 143366886 143367130 244 0
hScc1 BcellGSE12603 143371961 143372424 463 0
hScc1 BcellGSE12603 143373719 143374475 756 0
hScc1 BcellGSE12603 143380229 143380954 725 0
hScc1 BcellGSE12603 143404971 143405504 533 0
hScc1 BcellGSE12603 143412573 143413205 632 0
hScc1 BcellGSE12603 143417346 143417983 637 0
hScc1 BcellGSE12603 143422034 143422618 584 0
hScc1 BcellGSE12603 143423216 143424147 931 0
hScc1 BcellGSE12603 143424390 143425121 731 0
hScc1 BcellGSE12603 143436178 143436345 167 0
hScc1 BcellGSE12603 143438156 143439210 1054 0
hScc1 BcellGSE12603 143461035 143461818 783 0
hScc1 BcellGSE12603 143476090 143476461 371 0
hScc1 CdLSGSE12603 143379268 143379536 268 0
hScc1 CdLSGSE12603 143418386 143419019 633 0
hScc1 CdLSGSE12603 143453119 143453249 130 0
hScc1 CdLSGSE12603 143481830 143482886 1056 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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