Annotation Detail for LGI3
Basic Information Top
| Gene Symbol: | LGI3 ( LGIL4 ) |
|---|---|
| Gene Full Name: | leucine-rich repeat LGI family, member 3 |
| Band: | 8p21.3 |
| Quick Links | Entrez ID:203190; OMIM: 608302; Uniprot ID:LGI3_HUMAN; ENSEMBL ID: ENSG00000168481; HGNC ID: 18711 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 189 | N-linked (GlcNAc...) (Potential). | |
| 311 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 189 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 311 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 49 | Phosphothreonine(PKA) | HMM predict |
| 189 | N-linked | HMM predict |
| 190 | O-linked | HMM predict |
| 246 | Phosphotyrosine(Jak) | HMM predict |
| 272 | Phosphotyrosine(EGFR) | HMM predict |
| 311 | N-linked | HMM predict |
| 394 | O-linked | HMM predict |
| 457 | Phosphoserine(PKA) | HMM predict |
| 467 | Phosphoserine(IKK) | HMM predict |
- RefSeq ID: NM_139278
- Location:chr8 22060289-22070288
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K27me3 | colorectal | cancer | 22071958 | 22072477 | 519 | 1929 |
| NRSF | pAb | Jurkat | 22071491 | 22071811 | 320 | 1363 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 22058700 | 22058984 | 284 | 1448 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 22060354 | 22060526 | 172 | 0 |
| CTCF | CD4 | SISSRdata | 22060354 | 22060526 | 172 | 0 |
| CTCF | Hela | GSE12889 | 22060294 | 22060478 | 184 | 0 |
| CTCF | G2 | GSE9613 | 22060107 | 22061402 | 1295 | 0 |
| CTCF | G2 | GSE9613 | 22061698 | 22061910 | 212 | 0 |
| CTCF | G2 | GSE9613 | 22062240 | 22062499 | 259 | 0 |
| CTCF | G2 | GSE9613 | 22065017 | 22065225 | 208 | 0 |
| CTCF | G2 | GSE9613 | 22067197 | 22067819 | 622 | 0 |
| CTCF | G2 | GSE9613 | 22069902 | 22070434 | 532 | 0 |
| FOXA1 | MCF7 | GSE15244 | 22061836 | 22062158 | 322 | 0 |
| NRSF | pAb | Jurkat | 22063271 | 22063560 | 289 | 0 |
| NRSF | pAb | Jurkat | 22067385 | 22068081 | 696 | 0 |
| NRSF | pAb | Jurkat | 22069325 | 22069714 | 389 | 0 |
| hScc1 | Bcell | GSE12603 | 22060083 | 22060723 | 640 | 0 |
Validated miRNA targets