AutismKB 2.0

Annotation Detail for C9orf93


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Basic Information Top
Gene Symbol:C9orf93 ( DKFZp686P12113,FLJ39267,FLJ46740,MGC50805,bA536D16.1,bA778P13.1 )
Gene Full Name: chromosome 9 open reading frame 93
Band: 9p22.3
Quick LinksEntrez ID:203238; OMIM: NA; Uniprot ID:CI093_HUMAN; ENSEMBL ID: ENSG00000164989; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
28N-linkedHMM predict
128N-linkedHMM predict
256Phosphothreonine(PKA)HMM predict
257Phosphoserine(PKA)HMM predict
257Phosphoserine(CAMK2)HMM predict
257Phosphoserine(PKG)HMM predict
630N-linkedHMM predict
634Phosphothreonine(PKC)HMM predict
778Phosphothreonine(PKC)HMM predict
930Phosphoserine(PKA)HMM predict
1037Phosphoserine(CK2)HMM predict
1074Phosphoserine(CK1)HMM predict
1075Phosphoserine(ATM)HMM predict
1219Phosphothreonine(PKC)HMM predict
1246N-linkedHMM predict
1258Phosphoserine(IKK)HMM predict
1309O-linkedHMM predict
1310O-linkedHMM predict
1310PhosphoserineHMM predict
1310Phosphoserine(IKK)HMM predict
1310Phosphoserine(ATM)HMM predict
1310Phosphoserine(CDC2)HMM predict
1313O-linkedHMM predict
1322Phosphothreonine(PKA)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_173550
  • Location:chr9 15543096-15961894
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 15523339 15523600 261 19627
CTCF CD4SISSRdata 15523339 15523600 261 19627
H3K4me3 colorectalcancer 15541834 15542671 837 844
Myc hESGSE17917 15542692 15542948 256 277
PHF8 HeLaGSE20725 15542197 15543486 1289 255
Rb GrowingGSE19898 15542515 15542777 262 451
Rb GrowingGSE19898 15542800 15543070 270 162
Rb QuiescentGSE19898 15542840 15543200 360 77
Rb SenescentGSE19898 15542344 15542804 460 523
Rb SenescentGSE19898 15542825 15543233 408 68
hScc1 BcellGSE12603 15523175 15523386 211 19816
hScc1 BcellGSE12603 15542222 15542894 672 539
hScc1 CdLSGSE12603 15523175 15523386 211 19816
hScc1 CdLSGSE12603 15542063 15543055 992 538
p130 QuiescentGSE19898 15542816 15543135 319 121
p130 SenescentGSE19898 15542705 15543363 658 63
p130 shRbSenescentGSE19898 15542258 15542581 323 677
p130 shRbSenescentGSE19898 15542825 15543052 227 158
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 15732974 15733331 357 0
CBP T0-glioblastomaGSE21026 15768224 15768783 559 0
CTCF CD4GSE12889 15632465 15632631 166 0
CTCF CD4GSE12889 15827120 15827418 298 0
CTCF CD4SISSRdata 15632465 15632631 166 0
CTCF CD4SISSRdata 15827120 15827418 298 0
ER Fulvestrant-MCF7GSE14664 15603215 15603249 34 0
ER Fulvestrant-MCF7GSE14664 15603480 15603515 35 0
H3K4me3 colorectalcancer 15543523 15543878 355 0
Nanog hESGSE18292 15575114 15575483 369 0
Nanog hESGSE18292 15612541 15612870 329 0
Oct1 H2O2-HelaGSE14283 15603220 15603246 26 0
Oct1 H2O2-HelaGSE14283 15603481 15603509 28 0
Oct1 H2O2-HelaGSE14283 15813075 15813122 47 0
Oct1 H2O2-HelaGSE14283 15958956 15958985 29 0
Oct1 HelaGSE14283 15602394 15602432 38 0
Oct1 HelaGSE14283 15603469 15603516 47 0
Oct1 HelaGSE14283 15669765 15669794 29 0
Oct1 HelaGSE14283 15799470 15799533 63 0
Oct1 HelaGSE14283 15813075 15813122 47 0
Oct1 HelaGSE14283 15910076 15910148 72 0
Oct1 HelaGSE14283 15919159 15919302 143 0
Oct1 HelaGSE14283 15946654 15946687 33 0
Oct1 HelaGSE14283 15957168 15957215 47 0
P300 T30-glioblastomaGSE21026 15687107 15688188 1081 0
PolII HeLaGSE12783 15686362 15687623 1261 0
RNAII Tamoxifen-MCF7GSE14664 15919164 15919201 37 0
Sox2 hESGSE18292 15596721 15596949 228 0
Sox2 hESGSE18292 15612526 15613037 511 0
TAF HelaGSE8489 15696585 15696830 245 0
hScc1 BcellGSE12603 15596667 15596933 266 0
hScc1 BcellGSE12603 15632390 15632661 271 0
hScc1 G2GSE9613 15814373 15814695 322 0
p130 QuiescentGSE19898 15543569 15543777 208 0
p130 shRbQuiescentGSE19898 15542966 15543619 653 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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