AutismKB 2.0

Annotation Detail for ALDH1A3


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Basic Information Top
Gene Symbol:ALDH1A3 ( ALDH1A6,ALDH6,RALDH3 )
Gene Full Name: aldehyde dehydrogenase 1 family, member A3
Band: 15q26.3
Quick LinksEntrez ID:220; OMIM: 600463; Uniprot ID:AL1A3_HUMAN; ENSEMBL ID: ENSG00000184254; HGNC ID: 409
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
53N-linkedHMM predict
113Phosphothreonine(PKA)HMM predict
209Phosphothreonine(MAPK)HMM predict
278Phosphothreonine(PKA)HMM predict
327Phosphotyrosine(SRC)HMM predict
327Phosphotyrosine(EGFR)HMM predict
327Phosphotyrosine(Abl)HMM predict
334Phosphoserine(PKG)HMM predict
433N-linkedHMM predict
434Phosphoserine(PKA)HMM predict
492Phosphotyrosine(INSR)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_000693
  • Location:chr15 99237583-99274350
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 99230759 99231154 395 6627
CTCF CD4SISSRdata 99230759 99231154 395 6627
CTCF G2GSE9613 99230754 99231148 394 6633
CTCF G2GSE9613 99236904 99237893 989 185
PHF8 HeLaGSE20725 99236702 99238157 1455 154
hScc1 BcellGSE12603 99236810 99237624 814 367
hScc1 CdLSGSE12603 99230831 99231353 522 6492
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 99274674 99274703 29 338
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 99239543 99239849 306 0
CTCF G2GSE9613 99266836 99267412 576 0
CTCF G2GSE9613 99268073 99268562 489 0
FOXA1 MCF7GSE15244 99242738 99243888 1150 0
FOXA1 eGFPGSE10845 99242738 99243888 1150 0
FoxA1 MCF7MACSdata 99242867 99243116 249 0
GABP GMOGSE8489 99266772 99267483 711 0
GABP HepG2GSE8489 99266741 99267446 705 0
SRF GMOGSE8489 99266772 99267483 711 0
hScc1 BcellGSE12603 99251570 99251898 328 0
hScc1 BcellGSE12603 99262418 99262694 276 0
hScc1 BcellGSE12603 99271547 99272281 734 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
9379 mRNA ALDH1A3 chr15 99237583 99274352 1280 mRNA chr15 99270933 99276966Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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