Annotation Detail for CYBASC3

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Basic Information Top

Gene Symbol:	CYBASC3 ( FLJ39724,LCYTB,MGC20446 )
Gene Full Name:	cytochrome b, ascorbate dependent 3
Band:	11q12.2
Quick Links	Entrez ID:220002; OMIM: NA; Uniprot ID:CYAC3_HUMAN; ENSEMBL ID: ENSG00000162144; HGNC ID:
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
38	N-linked (GlcNAc...) (Potential).

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_153611
Location:chr11 60872855-60886304
strand:-

Upstream the gene:5 results
Downstream the gene:0 results
Inside the gene:15 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
GABP	k562	GSE8489	60885935	60886744	809	35
PHF8	Hs68minusFBS	GSE20725	60885608	60887110	1502	55
Rb	Growing	GSE19898	60886272	60886442	170	53
Rb	shRbSenescence	GSE19898	60886259	60886414	155	32
p130	shRbQuiescent	GSE19898	60885828	60886782	954	1

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ETS1	Jurkat	GSE17954	60885460	60886954	1494	0
H3K4me3	colorectal	cancer	60885055	60885887	832	0
H3ac	HepG2	E	60880621	60881915	1294	0
H3ac	HepG2	E	60883300	60883751	451	0
H3ac	HepG2	E	60885055	60885810	755	0
NFkBII	GM12878	GSE19485	60880568	60882393	1825	0
NFkBII	GM15510	GSE19485	60880229	60882522	2293	0
NFkBII	GM18505	GSE19485	60880793	60882387	1594	0
Oct1	Hela	GSE14283	60885552	60885644	92	0
PHF8	HeLa	GSE20725	60885365	60886869	1504	0
Pol2	GM12878	GSE19551	60885248	60887001	1753	0
Rb	Growing	GSE19898	60885958	60886176	218	0
Rb	Quiescent	GSE19898	60885724	60886447	723	0
p130	Quiescent	GSE19898	60885802	60886623	821	0
p130	Senescent	GSE19898	60885649	60886412	763	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
4579	HTC		chr11	60886082	60893239	223	mRNA	CYBASC3	chr11	60872855	60886305	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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