AutismKB 2.0

Annotation Detail for JMJD1C


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:JMJD1C ( DKFZp761F0118,FLJ14374,KIAA1380,RP11-10C13.2,TRIP8 )
Gene Full Name: jumonji domain containing 1C
Band: 10q21.3
Quick LinksEntrez ID:221037; OMIM: 604503; Uniprot ID:JHD2C_HUMAN; ENSEMBL ID: ENSG00000171988; HGNC ID: 12313
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
317Phosphoserine (By similarity).
373Phosphoserine.
376Phosphoserine.
379Phosphoserine.
430Phosphoserine.
552N6-acetyllysine.
638Phosphoserine.
641Phosphoserine.
2070LXXLL motif.
Location(AA) Modifications Resource
2053PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
96Phosphoserine(ATM)HMM predict
98Phosphothreonine(PKC)HMM predict
264Phosphoserine(PKG)HMM predict
264Phosphoserine(PKA)HMM predict
284Phosphoserine(CDC2)HMM predict
284Phosphoserine(CDK)HMM predict
284PhosphoserineHMM predict
317Phosphoserine(PKA)HMM predict
317Phosphoserine(CK2)HMM predict
320Phosphoserine(CK2)HMM predict
371N-linkedHMM predict
376Phosphoserine(CK1)HMM predict
376Phosphoserine(CK2)HMM predict
378Phosphoserine(CK2)HMM predict
381Phosphoserine(CK1)HMM predict
381Phosphoserine(IKK)HMM predict
384Phosphoserine(CK1)HMM predict
391N-linkedHMM predict
392PhosphoserineHMM predict
405N-linkedHMM predict
410N-linkedHMM predict
451Phosphoserine(PKA)HMM predict
468Phosphoserine(IKK)HMM predict
505Phosphothreonine(MAPK)HMM predict
514N-linkedHMM predict
517N-linkedHMM predict
525N-linkedHMM predict
540N-linkedHMM predict
580O-linkedHMM predict
581N-linkedHMM predict
584Phosphoserine(CK2)HMM predict
586N-linkedHMM predict
601Phosphoserine(CDC2)HMM predict
639Phosphoserine(CDC2)HMM predict
641Phosphoserine(CDC2)HMM predict
641Phosphoserine(MAPK)HMM predict
691Phosphothreonine(PKC)HMM predict
701Phosphoserine(CDC2)HMM predict
734Phosphoserine(ATM)HMM predict
759Phosphothreonine(MAPK)HMM predict
770Phosphoserine(ATM)HMM predict
772O-linkedHMM predict
772O-linkedHMM predict
772Phosphothreonine(MAPK)HMM predict
772Phosphothreonine(CDK)HMM predict
776O-linkedHMM predict
784O-linkedHMM predict
807O-linkedHMM predict
817Phosphoserine(PKB)HMM predict
822Phosphoserine(CK1)HMM predict
868N-linkedHMM predict
900Phosphoserine(PKG)HMM predict
929O-linkedHMM predict
939O-linkedHMM predict
982N-linkedHMM predict
986Phosphothreonine(PKC)HMM predict
1048N-linkedHMM predict
1055Phosphoserine(CDC2)HMM predict
1057Phosphoserine(CK1)HMM predict
1058Phosphoserine(CDC2)HMM predict
1058Phosphoserine(ATM)HMM predict
1087Phosphoserine(IKK)HMM predict
1137O-linkedHMM predict
1141O-linkedHMM predict
1192O-linkedHMM predict
1224Phosphotyrosine(INSR)HMM predict
1226O-linkedHMM predict
1228O-linkedHMM predict
1247Phosphoserine(ATM)HMM predict
1271Phosphoserine(CK1)HMM predict
1271Phosphoserine(IKK)HMM predict
1281N-linkedHMM predict
1311Phosphoserine(CDC2)HMM predict
1312O-linkedHMM predict
1317Phosphoserine(IKK)HMM predict
1330O-linkedHMM predict
1330Phosphoserine(CK2)HMM predict
1379Phosphoserine(IKK)HMM predict
1382O-linkedHMM predict
1407Phosphoserine(CK1)HMM predict
1418Phosphoserine(CK1)HMM predict
1423O-linkedHMM predict
1427O-linkedHMM predict
1439Phosphoserine(ATM)HMM predict
1457O-linkedHMM predict
1460O-linkedHMM predict
1465Phosphoserine(IKK)HMM predict
1470O-linkedHMM predict
1498N-linkedHMM predict
1509N-linkedHMM predict
1520O-linkedHMM predict
1592Phosphoserine(CK1)HMM predict
1624Phosphoserine(CDK)HMM predict
1628Phosphoserine(ATM)HMM predict
1631Phosphoserine(ATM)HMM predict
1631PhosphoserineHMM predict
1636Phosphoserine(CK1)HMM predict
1642Phosphothreonine(PKC)HMM predict
1649Phosphothreonine(PKC)HMM predict
1761Phosphoserine(PKA)HMM predict
1761Phosphoserine(PKG)HMM predict
1779Phosphotyrosine(INSR)HMM predict
1779Phosphotyrosine(SRC)HMM predict
1779Phosphotyrosine(Syk)HMM predict
1868S-palmitoylHMM predict
1880Phosphoserine(PKG)HMM predict
1922Phosphothreonine(PKC)HMM predict
1973Phosphoserine(ATM)HMM predict
1978Phosphothreonine(MAPK)HMM predict
1978PhosphothreonineHMM predict
2001Phosphothreonine(MAPK)HMM predict
2001Phosphothreonine(CDK)HMM predict
2005Phosphoserine(ATM)HMM predict
2045Phosphoserine(IKK)HMM predict
2053Phosphoserine(CDC2)HMM predict
2053Phosphoserine(MAPK)HMM predict
2053Phosphoserine(CDK)HMM predict
2065Phosphothreonine(PKC)HMM predict
2101Phosphoserine(IKK)HMM predict
2175N-linkedHMM predict
2178N-linkedHMM predict
2251N-linkedHMM predict
2506SulfotyrosineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004241
  • Location:chr10 64596995-64698987
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 64713683 64713731 48 14720
hScc1 CdLSGSE12603 64698666 64699424 758 58
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 64596521 64596922 401 274
CTCF CD4SISSRdata 64596521 64596922 401 274
hScc1 BcellGSE12603 64596605 64596814 209 286
hScc1 CdLSGSE12603 64596289 64597065 776 319
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 64646944 64647327 383 0
CTCF CD4SISSRdata 64646944 64647327 383 0
Fos K562GSE19551 64666060 64666669 609 0
GABP k562GSE8489 64641248 64641477 229 0
H3K4me3 colorectalcancer 64697725 64698913 1188 0
H3ac HepG2E 64697689 64699128 1439 0
Jun K562GSE19551 64666193 64666574 381 0
Nanog hESGSE18292 64629557 64629855 298 0
Oct4 ESGSE20650 64629537 64629940 403 0
P300 T0-glioblastomaGSE21026 64665913 64666760 847 0
P300 T30-glioblastomaGSE21026 64665925 64666628 703 0
Pol2 GM12878GSE19551 64698469 64699292 823 0
PolII HeLaGSE12783 64694604 64695557 953 0
PolII HeLaGSE12783 64697174 64699488 2314 0
RARA MCF7GSE15244 64698489 64699128 639 0
TAF HelaGSE8489 64697662 64699128 1466 0
TAF k562GSE8489 64695547 64699307 3760 0
USF2 HepG2E 64698302 64699023 721 0
hScc1 BcellGSE12603 64698666 64699057 391 0
hScc1 CdLSGSE12603 64646796 64647367 571 0
p130 QuiescentGSE19898 64698614 64699201 587 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
3225 mRNA MGC14425 chr10 64894994 64896326 352 mRNA JMJD1C chr10 64644652 64895612Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved