Annotation Detail for FDFT1
Basic Information Top
| Gene Symbol: | FDFT1 ( DGPT,ERG9,SQS,SS ) |
|---|---|
| Gene Full Name: | farnesyl-diphosphate farnesyltransferase 1 |
| Band: | 8p23.1 |
| Quick Links | Entrez ID:2222; OMIM: 184420; Uniprot ID:FDFT_HUMAN; ENSEMBL ID: ENSG00000079459; HGNC ID: 3629 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 14 | Phosphotyrosine(SRC) | HMM predict |
| 35 | Phosphoserine(IKK) | HMM predict |
| 37 | Phosphoserine(CK1) | HMM predict |
| 38 | Phosphoserine(CDC2) | HMM predict |
| 48 | N-linked | HMM predict |
| 114 | Phosphoserine | HMM predict |
| 188 | Phosphoserine(CAMK2) | HMM predict |
| 282 | N-linked | HMM predict |
| 287 | N-linked | HMM predict |
| 352 | Phosphoserine(ATM) | HMM predict |
| 357 | Phosphoserine(CK1) | HMM predict |
| 382 | Phosphotyrosine(INSR) | HMM predict |
- RefSeq ID: NM_004462
- Location:chr8 11697598-11734225
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Fos | K562 | GSE19551 | 11697059 | 11697877 | 818 | 131 |
| H3ac | HepG2 | E | 11691028 | 11691346 | 318 | 6412 |
| H3ac | HepG2 | E | 11695865 | 11696206 | 341 | 1563 |
| PHF8 | HeLa | GSE20725 | 11696708 | 11698420 | 1712 | 35 |
| USF2 | HepG2 | E | 11695865 | 11696206 | 341 | 1563 |
| hScc1 | Bcell | GSE12603 | 11697190 | 11697986 | 796 | 11 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T0-glioblastoma | GSE21026 | 11734588 | 11734802 | 214 | 470 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 11729311 | 11729587 | 276 | 0 |
| CTCF | CD4 | SISSRdata | 11729311 | 11729587 | 276 | 0 |
| CTCF | G2 | GSE9613 | 11697127 | 11698119 | 992 | 0 |
| CTCF | G2 | GSE9613 | 11703182 | 11703466 | 284 | 0 |
| FOXA1 | DLD1 | GSE12801 | 11703751 | 11704299 | 548 | 0 |
| FOXA1 | MCF7 | GSE15244 | 11698052 | 11698400 | 348 | 0 |
| FOXA1 | MCF7 | GSE15244 | 11703679 | 11704228 | 549 | 0 |
| Gata2 | K562 | GSE18868 | 11715091 | 11715774 | 683 | 0 |
| H3K4me3 | colorectal | cancer | 11698082 | 11698953 | 871 | 0 |
| H3ac | HepG2 | E | 11698188 | 11699481 | 1293 | 0 |
| H3ac | HepG2 | E | 11700820 | 11701994 | 1174 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 11696747 | 11698857 | 2110 | 0 |
| Rb | Quiescent | GSE19898 | 11698169 | 11698517 | 348 | 0 |
| TAF | k562 | GSE8489 | 11699093 | 11699481 | 388 | 0 |
| TFAP2C | MCF7 | GSE21234 | 11703644 | 11704245 | 601 | 0 |
| p130 | Senescent | GSE19898 | 11703760 | 11703940 | 180 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25078 | mRNA | FDFT1 | chr8 | 11697663 | 11734215 | 279 | EST | chr8 | 11733604 | 11733883 | Sense/Antisense (SA) pairs | |