AutismKB 2.0

Annotation Detail for GPRC6A


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Basic Information Top
Gene Symbol:GPRC6A ( GPCR,bA86F4.3 )
Gene Full Name: G protein-coupled receptor, family C, group 6, member A
Band: 6q22.1
Quick LinksEntrez ID:222545; OMIM: 613572; Uniprot ID:GPC6A_HUMAN; ENSEMBL ID: ENSG00000173612; HGNC ID: 18510
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
332N-linked (GlcNAc...) (Potential).
567N-linked (GlcNAc...) (Potential).
590N-linked (GlcNAc...) (Potential).
733N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
332N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
567N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
590N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
733N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
50Phosphoserine(CK2)HMM predict
50Phosphoserine(CK1)HMM predict
50PhosphoserineHMM predict
54Phosphoserine(CDC2)HMM predict
86N-linkedHMM predict
113Phosphothreonine(PKC)HMM predict
121N-linkedHMM predict
171Phosphoserine(CK2)HMM predict
220Phosphotyrosine(INSR)HMM predict
259N-linkedHMM predict
312O-linkedHMM predict
332N-linkedHMM predict
338Phosphoserine(IKK)HMM predict
378N-linkedHMM predict
452N-linkedHMM predict
474Phosphotyrosine(Jak)HMM predict
474Phosphotyrosine(Syk)HMM predict
527Phosphoserine(ATM)HMM predict
555N-linkedHMM predict
567N-linkedHMM predict
664Phosphothreonine(PKA)HMM predict
673S-palmitoylHMM predict
733N-linkedHMM predict
778Phosphotyrosine(Syk)HMM predict
862O-linkedHMM predict
867Phosphoserine(CDC2)HMM predict
870Phosphoserine(IKK)HMM predict
873Phosphoserine(IKK)HMM predict
877N-linkedHMM predict
881O-linkedHMM predict
882N-linkedHMM predict
886O-linkedHMM predict
910N-linkedHMM predict
917Phosphothreonine(PKC)HMM predict
926IsoleucineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_148963
  • Location:chr6 117219940-117256890
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 117274921 117275548 627 18344
ER E2-MCF7GSE14664 117265314 117265416 102 8475
Fos K562GSE19551 117267875 117268309 434 11202
Oct1 HelaGSE14283 117272020 117272051 31 15145
hScc1 G2GSE9613 117274883 117275548 665 18325
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 117207487 117207968 481 12213
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Nanog ESGSE20650 117255815 117256094 279 0
Oct1 HelaGSE14283 117248377 117248411 34 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018