AutismKB 2.0

Annotation Detail for FGF13


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Basic Information Top
Gene Symbol:FGF13 ( FGF2,FHF-2,FHF2 )
Gene Full Name: fibroblast growth factor 13
Band: Xq26.3-q27.1
Quick LinksEntrez ID:2258; OMIM: 300070; Uniprot ID:FGF13_HUMAN; ENSEMBL ID: ENSG00000129682; HGNC ID: 3670
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
30Phosphoserine(CDC2)HMM predict
32O-linkedHMM predict
97Phosphoserine(CK1)HMM predict
99Phosphotyrosine(INSR)HMM predict
132SulfotyrosineHMM predict
151Phosphotyrosine(Syk)HMM predict
218O-linkedHMM predict
220Phosphoserine(IKK)HMM predict
222Phosphothreonine(MAPK)HMM predict
222Phosphothreonine(CDK)HMM predict
222O-linkedHMM predict
230Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004114
  • Location:chrX 137541401-137621492
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 137521409 137521446 37 19974
Oct1 HelaGSE14283 137531667 137531710 43 9713
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 137620330 137622090 1760 0
ER E2-MCF7GSE14664 137573840 137573891 51 0
ER Fulvestrant-MCF7GSE14664 137573844 137573896 52 0
Oct1 H2O2-HelaGSE14283 137573856 137573883 27 0
Oct1 H2O2-HelaGSE14283 137621211 137621254 43 0
Oct1 HelaGSE14283 137550891 137550918 27 0
Oct1 HelaGSE14283 137573850 137573885 35 0
Oct1 HelaGSE14283 137594000 137594033 33 0
Oct1 HelaGSE14283 137621211 137621255 44 0
TFAP2C MCF7GSE21234 137620174 137620569 395 0
hScc1 G2GSE9613 137620543 137622021 1478 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7b hsa-let-7b 22 18668040
hsa-let-7b hsa-let-7b 22 18668040
hsa-let-7b* hsa-let-7b 22 18668040
hsa-let-7b* hsa-let-7b 22 18668040
hsa-miR-1 hsa-mir-1-2 18 18668040
hsa-miR-1 hsa-mir-1-1 20 18668040
hsa-miR-1 hsa-mir-1-2 18 18668040
hsa-miR-1 hsa-mir-1-1 20 18668040
hsa-miR-155 hsa-mir-155 21 18668040
hsa-miR-155 hsa-mir-155 21 18668040
hsa-miR-155* hsa-mir-155 21 18668040
hsa-miR-155* hsa-mir-155 21 18668040
hsa-miR-16 hsa-mir-16-1 13 18668040
hsa-miR-16 hsa-mir-16-2 3 18668040
hsa-miR-16 hsa-mir-16-1 13 18668040
hsa-miR-16 hsa-mir-16-2 3 18668040
hsa-miR-30a hsa-mir-30a 6 18668040
hsa-miR-30a hsa-mir-30a 6 18668040
hsa-miR-30a* hsa-mir-30a 6 18668040
hsa-miR-30a* hsa-mir-30a 6 18668040
hsa-miR-30b hsa-mir-30b 8 18668040
hsa-miR-30b hsa-mir-30b 8 18668040
hsa-miR-30b* hsa-mir-30b 8 18668040
hsa-miR-30b* hsa-mir-30b 8 18668040
hsa-miR-30c hsa-mir-30c-2 6 18668040
hsa-miR-30c hsa-mir-30c-1 1 18668040
hsa-miR-30c hsa-mir-30c-2 6 18668040
hsa-miR-30c hsa-mir-30c-1 1 18668040
hsa-miR-30c-1* hsa-mir-30c-1 1 18668040
hsa-miR-30c-1* hsa-mir-30c-1 1 18668040
hsa-miR-30c-2* hsa-mir-30c-2 6 18668040
hsa-miR-30c-2* hsa-mir-30c-2 6 18668040
hsa-miR-30d hsa-mir-30d 8 18668040
hsa-miR-30d hsa-mir-30d 8 18668040
hsa-miR-30d* hsa-mir-30d 8 18668040
hsa-miR-30d* hsa-mir-30d 8 18668040
hsa-miR-30e hsa-mir-30e 1 18668040
hsa-miR-30e hsa-mir-30e 1 18668040
hsa-miR-30e* hsa-mir-30e 1 18668040
hsa-miR-30e* hsa-mir-30e 1 18668040
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
28199 EST chrX 137519133 137523774 167 mRNA FGF13 chrX 137439254 137519347Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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