AutismKB 2.0

Annotation Detail for GPC5


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Basic Information Top
Gene Symbol:GPC5 ( - )
Gene Full Name: glypican 5
Band: 13q31.3
Quick LinksEntrez ID:2262; OMIM: 602446; Uniprot ID:GPC5_HUMAN; ENSEMBL ID: ENSG00000179399; HGNC ID: 4453
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
120N-linked (GlcNAc...) (Potential).
237N-linked (GlcNAc...) (Potential).
441O-linked (Xyl...) (glycosaminoglycan)
486O-linked (Xyl...) (glycosaminoglycan)
495O-linked (Xyl...) (glycosaminoglycan)
507O-linked (Xyl...) (glycosaminoglycan)
509O-linked (Xyl...) (glycosaminoglycan)
527N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
120N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
237N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
441O-linked (Xyl...) (glycosaminoglycan)(Potential).Swiss-Prot 53.0
486O-linked (Xyl...) (glycosaminoglycan)(Potential).Swiss-Prot 53.0
495O-linked (Xyl...) (glycosaminoglycan)(Potential).Swiss-Prot 53.0
507O-linked (Xyl...) (glycosaminoglycan)(Potential).Swiss-Prot 53.0
509O-linked (Xyl...) (glycosaminoglycan)(Potential).Swiss-Prot 53.0
527N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
51Phosphoserine(ATM)HMM predict
91O-linkedHMM predict
95Phosphothreonine(PKC)HMM predict
120N-linkedHMM predict
140Phosphoserine(PKG)HMM predict
237N-linkedHMM predict
258S-palmitoylHMM predict
351Phosphothreonine(MAPK)HMM predict
515Phosphothreonine(PKC)HMM predict
527N-linkedHMM predict
541Phosphoserine(IKK)HMM predict
545O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004466
  • Location:chr13 90848887-92317485
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 90841993 90842033 40 6875
ER Fulvestrant-MCF7GSE14664 90841975 90842034 59 6883
Oct1 HelaGSE14283 90841966 90842036 70 6887
hScc1 CdLSGSE12603 90831828 90832043 215 16952
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 91576011 91576232 221 0
CBP T30-glioblastomaGSE21026 91576008 91576340 332 0
CTCF CD4GSE12889 91172613 91172810 197 0
CTCF CD4SISSRdata 91172613 91172810 197 0
CTCF G2GSE9613 90848743 90850407 1664 0
CTCF G2GSE9613 91172538 91173055 517 0
CTCF G2GSE9613 91267567 91267853 286 0
CTCF G2GSE9613 91637674 91638004 330 0
ER E2-MCF7GSE14664 91439627 91439668 41 0
ER E2-MCF7GSE14664 91848526 91848558 32 0
ER E2-MCF7GSE14664 91858827 91858901 74 0
ER E2-MCF7GSE14664 91934965 91935131 166 0
ER E2-MCF7GSE14664 92273807 92273850 43 0
ER Fulvestrant-MCF7GSE14664 91043112 91043149 37 0
ER Fulvestrant-MCF7GSE14664 91688872 91688906 34 0
ER Fulvestrant-MCF7GSE14664 91845218 91845325 107 0
ER Fulvestrant-MCF7GSE14664 91935023 91935116 93 0
ER Fulvestrant-MCF7GSE14664 92042096 92042129 33 0
ER Fulvestrant-MCF7GSE14664 92116560 92116641 81 0
GABP HelaGSE8489 91329124 91329569 445 0
GABP HelaGSE8489 91351659 91352110 451 0
GABP HelaGSE8489 91536248 91536611 363 0
GABP k562GSE8489 91074203 91074483 280 0
GABP k562GSE8489 92027838 92028497 659 0
H3K27me3 colorectalcancer 90849738 90851111 1373 0
NRSF mAbJurkat 92108569 92109100 531 0
NRSF-mono JurkatQuESTdata 92009448 92009695 247 0
NRSF-mono JurkatQuESTdata 92108593 92108802 209 0
NRSF-poly JurkatQuESTdata 92009325 92009759 434 0
NRSF-poly JurkatQuESTdata 92108561 92108940 379 0
Nanog ESGSE20650 91860729 91861066 337 0
Nanog ESGSE20650 91950399 91950997 598 0
Nanog ESGSE20650 92141381 92141601 220 0
Nanog hESGSE18292 90971055 90971799 744 0
Nanog hESGSE18292 90995052 90995428 376 0
Nanog hESGSE18292 91095795 91096218 423 0
Nanog hESGSE18292 92170065 92170406 341 0
Oct1 H2O2-HelaGSE14283 90957395 90957436 41 0
Oct1 H2O2-HelaGSE14283 90963738 90963769 31 0
Oct1 H2O2-HelaGSE14283 91094377 91094408 31 0
Oct1 H2O2-HelaGSE14283 91203059 91203088 29 0
Oct1 H2O2-HelaGSE14283 91361071 91361099 28 0
Oct1 H2O2-HelaGSE14283 91540306 91540337 31 0
Oct1 H2O2-HelaGSE14283 91620194 91620221 27 0
Oct1 H2O2-HelaGSE14283 91858837 91858895 58 0
Oct1 H2O2-HelaGSE14283 91870075 91870103 28 0
Oct1 H2O2-HelaGSE14283 91882175 91882207 32 0
Oct1 H2O2-HelaGSE14283 91889921 91889947 26 0
Oct1 HelaGSE14283 90957406 90957438 32 0
Oct1 HelaGSE14283 90963734 90963768 34 0
Oct1 HelaGSE14283 91010599 91010632 33 0
Oct1 HelaGSE14283 91036419 91036459 40 0
Oct1 HelaGSE14283 91037888 91037918 30 0
Oct1 HelaGSE14283 91043112 91043143 31 0
Oct1 HelaGSE14283 91076070 91076100 30 0
Oct1 HelaGSE14283 91094378 91094408 30 0
Oct1 HelaGSE14283 91203059 91203100 41 0
Oct1 HelaGSE14283 91404416 91404468 52 0
Oct1 HelaGSE14283 91415391 91415424 33 0
Oct1 HelaGSE14283 91460545 91460577 32 0
Oct1 HelaGSE14283 91540307 91540337 30 0
Oct1 HelaGSE14283 91555683 91555721 38 0
Oct1 HelaGSE14283 91655774 91655803 29 0
Oct1 HelaGSE14283 91680560 91680588 28 0
Oct1 HelaGSE14283 91811399 91811431 32 0
Oct1 HelaGSE14283 91812542 91812573 31 0
Oct1 HelaGSE14283 91858870 91858901 31 0
Oct1 HelaGSE14283 91870075 91870104 29 0
Oct1 HelaGSE14283 91873479 91873513 34 0
Oct1 HelaGSE14283 91882172 91882211 39 0
Oct1 HelaGSE14283 91889918 91889947 29 0
Oct1 HelaGSE14283 91909021 91909051 30 0
Oct1 HelaGSE14283 91924960 91925008 48 0
Oct1 HelaGSE14283 92075980 92076031 51 0
Oct1 HelaGSE14283 92098083 92098117 34 0
Oct1 HelaGSE14283 92115382 92115412 30 0
Oct1 HelaGSE14283 92115497 92115527 30 0
Oct1 HelaGSE14283 92140522 92140586 64 0
Oct1 HelaGSE14283 92269518 92269553 35 0
Oct1 HelaGSE14283 92281060 92281102 42 0
Oct4 ESGSE20650 91835755 91835865 110 0
Oct4 hESGSE17917 90856991 90857302 311 0
RNAII Tamoxifen-MCF7GSE14664 91845423 91845510 87 0
RNAII Tamoxifen-MCF7GSE14664 92223925 92224011 86 0
RNAII Tamoxifen-MCF7GSE14664 92273809 92273844 35 0
SRF k562GSE8489 90976488 90976917 429 0
STAT1 HeLaGSE12782 91080783 91083318 2535 0
STAT1 HeLaGSE12783 91080856 91082016 1160 0
STAT1 HeLaGSE12783 91082038 91083318 1280 0
STAT1 HeLaGSE12783 91089186 91090192 1006 0
STAT1 IFNSISSRdata 91089277 91090231 954 0
Sox2 hESGSE18292 90857038 90857244 206 0
Sox2 hESGSE18292 91637792 91637955 163 0
TAF k562GSE8489 91038552 91039903 1351 0
TAF k562GSE8489 92015750 92016679 929 0
TAF k562GSE8489 92022410 92023676 1266 0
TAF k562GSE8489 92027838 92028497 659 0
USF1 HepG2E 90854091 90854373 282 0
USF1 HepG2E 91388782 91388952 170 0
hScc1 BcellGSE12603 90857149 90857333 184 0
hScc1 CdLSGSE12603 90857149 90857357 208 0
hScc1 CdLSGSE12603 91172377 91173020 643 0
hScc1 CdLSGSE12603 91637499 91638309 810 0
hScc1 G2GSE9613 90848743 90850407 1664 0
hScc1 G2GSE9613 91172469 91173055 586 0
hScc1 G2GSE9613 91232367 91232507 140 0
hScc1 G2GSE9613 91637637 91638004 367 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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