AutismKB 2.0

Annotation Detail for CLCA4


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:CLCA4 ( CaCC,CaCC2,MGC142247,MGC142249 )
Gene Full Name: chloride channel accessory 4
Band: 1p22.3
Quick LinksEntrez ID:22802; OMIM: NA; Uniprot ID:CLCA4_HUMAN; ENSEMBL ID: ENSG00000016602; HGNC ID: 2018
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
75N-linked (GlcNAc...) (Potential).
340N-linked (GlcNAc...) (Potential).
504N-linked (GlcNAc...) (Potential).
542N-linked (GlcNAc...) (Potential).
588N-linked (GlcNAc...) (Potential).
628N-linked (GlcNAc...) (Potential).
811N-linked (GlcNAc...).
832N-linked (GlcNAc...) (Potential).
837N-linked (GlcNAc...) (Potential).
852N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_012128
  • Location:chr1 86785348-86819017
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
p63 keratinocytesGSE17611 86784724 86785579 855 197
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Nanog ESGSE20650 86832696 86833079 383 13870
No data
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018