Annotation Detail for COPZ1
Basic Information Top
| Gene Symbol: | COPZ1 ( COPZ,zeta1-COP ) |
|---|---|
| Gene Full Name: | coatomer protein complex, subunit zeta 1 |
| Band: | 12q13.13 |
| Quick Links | Entrez ID:22818; OMIM: NA; Uniprot ID:COPZ1_HUMAN; ENSEMBL ID: ENSG00000111481; HGNC ID: 2243 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 1 | N-acetylmethionine. | |
| 161 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 35 | Phosphotyrosine(Syk) | HMM predict |
| 50 | N-linked | HMM predict |
| 161 | Phosphoserine(IKK) | HMM predict |
- RefSeq ID: NM_016057
- Location:chr12 53005177-53031899
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 53004729 | 53005066 | 337 | 280 |
| CTCF | CD4 | SISSRdata | 53004729 | 53005066 | 337 | 280 |
| CTCF | G2 | GSE9613 | 53004487 | 53005440 | 953 | 214 |
| FOXA1 | MCF7 | GSE15244 | 53004448 | 53005545 | 1097 | 181 |
| Fos | K562 | GSE19551 | 53004521 | 53005463 | 942 | 186 |
| H3ac | HepG2 | E | 53004448 | 53005824 | 1376 | 42 |
| KLF4 | hES | GSE17917 | 53004544 | 53004839 | 295 | 486 |
| Oct1 | H2O2-Hela | GSE14283 | 53001246 | 53001283 | 37 | 3913 |
| Oct1 | H2O2-Hela | GSE14283 | 53001355 | 53001393 | 38 | 3804 |
| Oct1 | Hela | GSE14283 | 53001355 | 53001393 | 38 | 3804 |
| RARA | MCF7 | GSE15244 | 53004448 | 53005650 | 1202 | 129 |
| RARG | MCF7 | GSE15244 | 53004522 | 53005620 | 1098 | 107 |
| TAF | Hela | GSE8489 | 53004448 | 53005824 | 1376 | 42 |
| USF1 | HepG2 | E | 53004406 | 53005824 | 1418 | 63 |
| USF2 | HepG2 | E | 53004406 | 53005824 | 1418 | 63 |
| hScc1 | Bcell | GSE12603 | 53004406 | 53005119 | 713 | 415 |
| hScc1 | CdLS | GSE12603 | 53004594 | 53005281 | 687 | 240 |
| hScc1 | G2 | GSE9613 | 53004522 | 53005085 | 563 | 374 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| p130 | Quiescent | GSE19898 | 53033054 | 53033501 | 447 | 1378 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 53016575 | 53016816 | 241 | 0 |
| CTCF | CD4 | SISSRdata | 53016575 | 53016816 | 241 | 0 |
| CTCF | Jurkat | GSE12889 | 53016600 | 53016745 | 145 | 0 |
| H3K4me3 | colorectal | cancer | 53005248 | 53005824 | 576 | 0 |
| H3ac | HepG2 | E | 53006506 | 53006989 | 483 | 0 |
| H3ac | HepG2 | E | 53008654 | 53009295 | 641 | 0 |
| Nanog | hES | GSE18292 | 53008766 | 53009070 | 304 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 53015755 | 53015787 | 32 | 0 |
| Oct1 | Hela | GSE14283 | 53015755 | 53015787 | 32 | 0 |
| PHF8 | 293T | GSE20725 | 53005059 | 53005655 | 596 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 53004776 | 53005634 | 858 | 0 |
| Rb | shRbQuiescent | GSE19898 | 53005269 | 53005416 | 147 | 0 |
| TAF | Hela | GSE8489 | 53006506 | 53006989 | 483 | 0 |
| TAF | Hela | GSE8489 | 53008654 | 53009091 | 437 | 0 |
| TAF | Hela | GSE8489 | 53010768 | 53011079 | 311 | 0 |
| TAF | k562 | GSE8489 | 53004736 | 53005824 | 1088 | 0 |
| TAFII | hES | GSE17917 | 53005124 | 53005363 | 239 | 0 |
| USF1 | HepG2 | E | 53008654 | 53009295 | 641 | 0 |
| USF2 | HepG2 | E | 53008654 | 53009295 | 641 | 0 |
| p130 | Quiescent | GSE19898 | 53005041 | 53005637 | 596 | 0 |
| p130 | Senescent | GSE19898 | 53004981 | 53005790 | 809 | 0 |
| p130 | shRbQuiescent | GSE19898 | 53005114 | 53005717 | 603 | 0 |
| p130 | shRbSenescent | GSE19898 | 53005009 | 53005796 | 787 | 0 |
Validated miRNA targets