AutismKB 2.0

Annotation Detail for RAB11FIP2


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Basic Information Top
Gene Symbol:RAB11FIP2 ( KIAA0941,Rab11-FIP2,nRip11 )
Gene Full Name: RAB11 family interacting protein 2 (class I)
Band: 10q26.11
Quick LinksEntrez ID:22841; OMIM: 608599; Uniprot ID:RFIP2_HUMAN; ENSEMBL ID: ENSG00000107560; HGNC ID: 29152
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
150Phosphoserine.
382Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
34N-linkedHMM predict
37Phosphotyrosine(Jak)HMM predict
49Phosphothreonine(PKC)HMM predict
117Phosphothreonine(PKA)HMM predict
146N-linkedHMM predict
162Phosphoserine(CDC2)HMM predict
179PhosphothreonineHMM predict
183O-linkedHMM predict
185O-linkedHMM predict
201Phosphoserine(CK1)HMM predict
224Phosphoserine(PKB)HMM predict
227Phosphoserine(IKK)HMM predict
229Phosphoserine(CK1)HMM predict
232Phosphoserine(ATM)HMM predict
267Phosphoserine(IKK)HMM predict
270Phosphoserine(CDC2)HMM predict
275Phosphothreonine(PKA)HMM predict
277Phosphoserine(PKA)HMM predict
277Phosphoserine(IKK)HMM predict
277Phosphoserine(CAMK2)HMM predict
306N-linkedHMM predict
328Phosphoserine(CK2)HMM predict
329Phosphoserine(CK1)HMM predict
382Phosphoserine(IKK)HMM predict
393Phosphoserine(CK1)HMM predict
399SulfotyrosineHMM predict
402SulfotyrosineHMM predict
472Phosphothreonine(PKA)HMM predict
480Phosphotyrosine(INSR)HMM predict
494Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014904
  • Location:chr10 119754418-119796103
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 119795873 119796870 997 268
NRSF JurkatSISSRdata 119796411 119796581 170 393
PHF8 HeLaGSE20725 119795475 119797127 1652 198
PHF8 Hs68minusFBSGSE20725 119795636 119797083 1447 256
RARA MCF7GSE15244 119803971 119804517 546 8141
Rb QuiescentGSE19898 119796069 119796342 273 102
Rb SenescentGSE19898 119796095 119796283 188 86
Rb shRbQuiescentGSE19898 119796433 119796719 286 473
TFAP2C MCF7GSE21234 119796099 119796314 215 103
hScc1 CdLSGSE12603 119795935 119796605 670 167
p130 shRbSenescentGSE19898 119795968 119796321 353 41
p63 keratinocytesGSE17611 119803750 119804594 844 8069
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me3 colorectalcancer 119795052 119795450 398 0
H3ac HepG2E 119794715 119795792 1077 0
hScc1 BcellGSE12603 119795756 119796400 644 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-1 hsa-mir-1-2 18 15685193
hsa-miR-1 hsa-mir-1-1 20 15685193
hsa-miR-124 hsa-mir-124-1 8 15685193
hsa-miR-124 hsa-mir-124-2 8 15685193
hsa-miR-124 hsa-mir-124-3 20 15685193
hsa-miR-373 hsa-mir-373 19 15685193
hsa-miR-373* hsa-mir-373 19 15685193
ID in Tarbase Data Type Support Type miRNA Gene Direct Support Publication
183 Unknown MicroArray miR-1 RAB11FIP2 n_a 15685193
Ensembl Protein Type Differentially expressed in Pathology or Event Mis Regulation Gene Expression Tumour Involvement
ENSG00000107560 "cardiac and skeletal muscles, cardiogenesis" n_a n_a "lymphoblast, lymphocyte, muscle cell" "benign tumour, carcinoma, malignant tumour, leukaemia, sarcoma"
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
3731 EST chr10 119755267 119755756 449 mRNA RAB11FIP2 chr10 119754418 119796104Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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