Annotation Detail for NLGN1
Basic Information Top
| Gene Symbol: | NLGN1 ( KIAA1070,MGC45115,NL1 ) |
|---|---|
| Gene Full Name: | neuroligin 1 |
| Band: | 3q26.31 |
| Quick Links | Entrez ID:22871; OMIM: 600568; Uniprot ID:NLGN1_HUMAN; ENSEMBL ID: ENSG00000169760; HGNC ID: 14291 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 109 | N-linked (GlcNAc...) (complex) (By | |
| 300 | N-linked (GlcNAc...) (complex) (By | |
| 340 | N-linked (GlcNAc...) (complex) (By | |
| 544 | N-linked (GlcNAc...) (By similarity). | |
| 680 | O-linked (GalNAc...) (By similarity). | |
| 683 | O-linked (GalNAc...) (By similarity). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 109 | N-linked (GlcNAc...) (complex) (Bysimilarity). | Swiss-Prot 53.0 |
| 300 | N-linked (GlcNAc...) (complex) (Bysimilarity). | Swiss-Prot 53.0 |
| 340 | N-linked (GlcNAc...) (complex) (Bysimilarity). | Swiss-Prot 53.0 |
| 544 | N-linked (GlcNAc...) (By similarity). | Swiss-Prot 53.0 |
| 680 | O-linked (GalNAc...) (By similarity). | Swiss-Prot 53.0 |
| 683 | O-linked (GalNAc...) (By similarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 85 | Phosphotyrosine(Abl) | HMM predict |
| 102 | Phosphoserine(MAPK) | HMM predict |
| 109 | N-linked | HMM predict |
| 155 | Phosphotyrosine(Syk) | HMM predict |
| 159 | Phosphotyrosine(INSR) | HMM predict |
| 300 | N-linked | HMM predict |
| 340 | N-linked | HMM predict |
| 440 | Phosphotyrosine(Abl) | HMM predict |
| 468 | Phosphothreonine(PKC) | HMM predict |
| 472 | Phosphothreonine(PKA) | HMM predict |
| 637 | Phosphoserine(ATM) | HMM predict |
| 640 | O-linked | HMM predict |
| 641 | O-linked | HMM predict |
| 643 | O-linked | HMM predict |
| 660 | Phosphoserine(PKG) | HMM predict |
| 660 | Phosphoserine(PKA) | HMM predict |
| 664 | O-linked | HMM predict |
| 690 | Phosphoserine(CK1) | HMM predict |
| 696 | O-linked | HMM predict |
| 822 | N-linked | HMM predict |
| 823 | N-linked | HMM predict |
| 832 | Proline | HMM predict |
| 836 | Phosphoserine(CK1) | HMM predict |
- RefSeq ID: NM_014932
- Location:chr3 174598937-175483809
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 174595853 | 174596410 | 557 | 2806 |
| CTCF | G2 | GSE9613 | 174598147 | 174598536 | 389 | 596 |
| H3K27me3 | colorectal | cancer | 174596367 | 174598066 | 1699 | 1721 |
| H3K27me3 | colorectal | cancer | 174598404 | 174599222 | 818 | 125 |
| H3K4me3 | colorectal | cancer | 174597492 | 174597865 | 373 | 1259 |
| Rb | Senescent | GSE19898 | 174595921 | 174596235 | 314 | 2860 |
| p130 | shRbQuiescent | GSE19898 | 174595644 | 174596468 | 824 | 2882 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | Jurkat | GSE12889 | 174729628 | 174729844 | 216 | 0 |
| CTCF | G2 | GSE9613 | 174612295 | 174612434 | 139 | 0 |
| CTCF | G2 | GSE9613 | 174633635 | 174633830 | 195 | 0 |
| CTCF | G2 | GSE9613 | 174754113 | 174754400 | 287 | 0 |
| CTCF | G2 | GSE9613 | 174784758 | 174785195 | 437 | 0 |
| CTCF | G2 | GSE9613 | 174818986 | 174819259 | 273 | 0 |
| CTCF | G2 | GSE9613 | 174844862 | 174845424 | 562 | 0 |
| CTCF | G2 | GSE9613 | 174985456 | 174985636 | 180 | 0 |
| CTCF | G2 | GSE9613 | 175072522 | 175072739 | 217 | 0 |
| CTCF | G2 | GSE9613 | 175193859 | 175194083 | 224 | 0 |
| CTCF | G2 | GSE9613 | 175224232 | 175224448 | 216 | 0 |
| CTCF | G2 | GSE9613 | 175291027 | 175291596 | 569 | 0 |
| CTCF | G2 | GSE9613 | 175325850 | 175326389 | 539 | 0 |
| FoxA1 | MCF7 | MACSdata | 175398717 | 175398973 | 256 | 0 |
| H3K27me3 | colorectal | cancer | 174785088 | 174785491 | 403 | 0 |
| Nanog | ES | GSE20650 | 174899767 | 174900274 | 507 | 0 |
| Nanog | hES | GSE18292 | 174754231 | 174754649 | 418 | 0 |
| Nanog | hES | GSE18292 | 175163583 | 175163761 | 178 | 0 |
| Nanog | hES | GSE18292 | 175211276 | 175211929 | 653 | 0 |
| Oct4 | hES | GSE21916 | 175211231 | 175211840 | 609 | 0 |
| Oct4 | hES | GSE21916 | 175433085 | 175433652 | 567 | 0 |
| PAX3-FKHR | Rh4 | GSE19063 | 175404453 | 175405889 | 1436 | 0 |
| RARA | MCF7 | GSE15244 | 175408639 | 175409350 | 711 | 0 |
| TFAP2C | MCF7 | GSE21234 | 174757060 | 174757348 | 288 | 0 |
| TFAP2C | MCF7 | GSE21234 | 174994410 | 174994942 | 532 | 0 |
| USF1 | HepG2 | E | 175332956 | 175333626 | 670 | 0 |
| USF2 | HepG2 | E | 175333024 | 175333752 | 728 | 0 |
| hScc1 | CdLS | GSE12603 | 175325885 | 175326278 | 393 | 0 |
| hScc1 | G2 | GSE9613 | 174612101 | 174612503 | 402 | 0 |
| hScc1 | G2 | GSE9613 | 175193859 | 175194083 | 224 | 0 |
| hScc1 | G2 | GSE9613 | 175325850 | 175326389 | 539 | 0 |
Validated miRNA targets