AutismKB 2.0

Annotation Detail for DENND3


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Basic Information Top
Gene Symbol:DENND3 ( KIAA0870 )
Gene Full Name: DENN/MADD domain containing 3
Band: 8q24.3
Quick LinksEntrez ID:22898; OMIM: NA; Uniprot ID:DEND3_HUMAN; ENSEMBL ID: ENSG00000105339; HGNC ID: 29134
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014957
  • Location:chr8 142207901-142275079
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NFkBII GM12878GSE19485 142191946 142193697 1751 15080
NFkBII GM12892GSE19485 142191974 142193630 1656 15100
NRSF pAbJurkat 142194509 142194817 308 13239
NRSF pAbJurkat 142195526 142195792 266 12243
NRSF pAbJurkat 142196941 142197091 150 10886
NRSF pAbJurkat 142205916 142206200 284 1844
TAF HelaGSE8489 142205377 142205625 248 2401
TFAP2C MCF7GSE21234 142194368 142195214 846 13111
TFAP2C MCF7GSE21234 142205813 142206327 514 1832
VDR GM10861-stimGSE22484 142194122 142201084 6962 10299
hScc1 BcellGSE12603 142198269 142198441 172 9547
hScc1 BcellGSE12603 142207087 142207991 904 363
p130 SenescentGSE19898 142196627 142196908 281 11134
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 142285685 142286271 586 10899
FOXA1 MCF7GSE15244 142275046 142275752 706 320
NFkBII GM12892GSE19485 142284842 142286670 1828 10677
NRSF pAbJurkat 142277042 142277502 460 2193
NRSF pAbJurkat 142284912 142285227 315 9990
NRSF pAbJurkat 142285629 142286680 1051 11075
TFAP2C MCF7GSE21234 142285586 142286240 654 10834
VDR GM10861-stimGSE22484 142285042 142286632 1590 10758
hScc1 BcellGSE12603 142291490 142291764 274 16548
hScc1 BcellGSE12603 142294200 142294426 226 19234
hScc1 CdLSGSE12603 142284979 142285479 500 10150
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 142240277 142240470 193 0
CTCF CD4GSE12889 142262729 142263032 303 0
CTCF CD4SISSRdata 142240277 142240470 193 0
CTCF CD4SISSRdata 142262729 142263032 303 0
ER Breast-CancerGSE22609 142238863 142239572 709 0
ER MCF7GSE19013 142239012 142239869 857 0
ER MCF7GSE19013 142264185 142264719 534 0
FOXA1 DLD1GSE12801 142210312 142210922 610 0
FOXA1 DLD1GSE12801 142211171 142211602 431 0
FOXA1 DLD1GSE12801 142233127 142233798 671 0
FOXA1 MCF7GSE15244 142232798 142233798 1000 0
FOXA1 MCF7GSE15244 142252599 142253459 860 0
FoxA1 MCF7MACSdata 142233258 142233695 437 0
H3K4me2 HCT116GSE10453 142208990 142209468 478 0
KLF4 hESGSE17917 142264724 142264891 167 0
Myc K562GSE19551 142252421 142252887 466 0
NFkBII GM12878GSE19485 142208293 142210055 1762 0
NRSF pAbJurkat 142212353 142212869 516 0
NRSF pAbJurkat 142215962 142216187 225 0
NRSF pAbJurkat 142250805 142252008 1203 0
NRSF pAbJurkat 142273118 142273515 397 0
NRSF-poly JurkatQuESTdata 142210974 142211345 371 0
Oct4 hESGSE17917 142240221 142240545 324 0
RARA MCF7GSE15244 142233227 142233798 571 0
RARG MCF7GSE15244 142232798 142233798 1000 0
RARG MCF7GSE15244 142237346 142237980 634 0
RARG MCF7GSE15244 142252918 142253459 541 0
Rb QuiescentGSE19898 142252628 142252801 173 0
TFAP2C MCF7GSE21234 142248252 142249458 1206 0
TFAP2C MCF7GSE21234 142254042 142254749 707 0
hScc1 BcellGSE12603 142239764 142240576 812 0
hScc1 BcellGSE12603 142248527 142248856 329 0
hScc1 BcellGSE12603 142249194 142250083 889 0
hScc1 BcellGSE12603 142252236 142252986 750 0
hScc1 BcellGSE12603 142253601 142254989 1388 0
hScc1 BcellGSE12603 142262839 142263255 416 0
hScc1 CdLSGSE12603 142207123 142209399 2276 0
hScc1 CdLSGSE12603 142240041 142240648 607 0
hScc1 CdLSGSE12603 142248456 142248856 400 0
hScc1 CdLSGSE12603 142252306 142253065 759 0
hScc1 CdLSGSE12603 142253601 142254745 1144 0
hScc1 CdLSGSE12603 142262839 142263178 339 0
hScc1 G2GSE9613 142252339 142254709 2370 0
hScc1 G2GSE9613 142273151 142273779 628 0
p130 QuiescentGSE19898 142224375 142224608 233 0
p130 shRbSenescentGSE19898 142226166 142226452 286 0
p130 shRbSenescentGSE19898 142232848 142233180 332 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
26024 mRNA KIAA0870 chr8 142207901 142275080 91 EST chr8 142263522 142278509Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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