AutismKB 2.0

Annotation Detail for FOXG1


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Basic Information Top
Gene Symbol:FOXG1 ( BF1,BF2,FHKL3,FKH2,FKHL1,FKHL2,FKHL3,FKHL4,FOXG1A,FOXG1B,FOXG1C,HBF-1,HBF-2,HBF-3,HBF-G2,HBF2,HFK1,HFK2,HFK3,KHL2,QIN )
Gene Full Name: forkhead box G1
Band: 14q12
Quick LinksEntrez ID:2290; OMIM: 164874; Uniprot ID:FOXG1_HUMAN; ENSEMBL ID: ENSG00000176165; HGNC ID: 3811
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005249
  • Location:chr14 28306037-28308620
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 28290401 28290761 360 15457
CTCF G2GSE9613 28293170 28293467 297 12719
Fos K562GSE19551 28305384 28305930 546 381
H3K27me3 colorectalcancer 28296073 28296352 279 9825
H3K27me3 colorectalcancer 28298283 28301794 3511 5999
H3K27me3 colorectalcancer 28303092 28304134 1042 2425
KLF4 hESGSE17917 28305354 28305606 252 558
hScc1 BcellGSE12603 28290366 28290793 427 15458
hScc1 BcellGSE12603 28293039 28293693 654 12672
hScc1 BcellGSE12603 28295928 28296448 520 9850
hScc1 BcellGSE12603 28304843 28305024 181 1104
hScc1 CdLSGSE12603 28293039 28293693 654 12672
hScc1 CdLSGSE12603 28295928 28296488 560 9830
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K27me3 colorectalcancer 28311663 28313330 1667 3876
hScc1 BcellGSE12603 28313221 28313776 555 4878
hScc1 CdLSGSE12603 28313288 28314028 740 5038
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 28307091 28307500 409 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-124 hsa-mir-124-1 8 21225654
hsa-miR-124 hsa-mir-124-2 8 21225654
hsa-miR-124 hsa-mir-124-3 20 21225654
hsa-miR-9 hsa-mir-9-1 1 21368052
hsa-miR-9 hsa-mir-9-2 5 21368052
hsa-miR-9 hsa-mir-9-3 15 21368052
hsa-miR-9 hsa-mir-9-1 1 18842901
hsa-miR-9 hsa-mir-9-2 5 18842901
hsa-miR-9 hsa-mir-9-3 15 18842901
hsa-miR-9 hsa-mir-9-1 1 17260156
hsa-miR-9 hsa-mir-9-2 5 17260156
hsa-miR-9 hsa-mir-9-3 15 17260156
hsa-miR-9* hsa-mir-9-2 5 21368052
hsa-miR-9* hsa-mir-9-3 15 21368052
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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