AutismKB 2.0

Annotation Detail for PDCD11


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:PDCD11 ( ALG-4,ALG4,KIAA0185,NFBP,RRP5 )
Gene Full Name: programmed cell death 11
Band: 10q24.33
Quick LinksEntrez ID:22984; OMIM: 612333; Uniprot ID:RRP5_HUMAN; ENSEMBL ID: ENSG00000148843; HGNC ID: 13408
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
7Phosphoserine.
437Phosphothreonine.
438Phosphoserine.
1360Phosphoserine.
1454Phosphoserine.
1493Phosphoserine.
1498Phosphoserine.
Location(AA) Modifications Resource
1360Phosphoserine.Swiss-Prot 53.0
1360PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
42Phosphothreonine(PKC)HMM predict
47Phosphoserine(PKA)HMM predict
47Phosphoserine(IKK)HMM predict
47Phosphoserine(PKG)HMM predict
54Phosphothreonine(PKC)HMM predict
64Phosphoserine(CK1)HMM predict
64Phosphoserine(CK2)HMM predict
65Phosphoserine(CK1)HMM predict
169Phosphoserine(PKG)HMM predict
195Phosphoserine(CK2)HMM predict
202Phosphotyrosine(Syk)HMM predict
260Phosphoserine(IKK)HMM predict
333S-palmitoylHMM predict
378MethyllysineHMM predict
379MethyllysineHMM predict
613Phosphoserine(CK2)HMM predict
722N-linkedHMM predict
778Phosphothreonine(PKC)HMM predict
834Phosphoserine(CK1)HMM predict
960N-linkedHMM predict
1002Phosphothreonine(PKC)HMM predict
1062S-palmitoylHMM predict
1077Phosphoserine(CDC2)HMM predict
1212O-linkedHMM predict
1267SulfotyrosineHMM predict
1300O-linkedHMM predict
1357Phosphoserine(ATM)HMM predict
1360Phosphoserine(CDK)HMM predict
1360Phosphoserine(CDC2)HMM predict
1422Phosphothreonine(CK2)HMM predict
1422Phosphothreonine(PKC)HMM predict
1476Phosphoserine(PKG)HMM predict
1493Phosphoserine(CK2)HMM predict
1498Phosphoserine(CK1)HMM predict
1545O-linkedHMM predict
1556Phosphoserine(CK2)HMM predict
1557Phosphoserine(CK2)HMM predict
1559Phosphoserine(CK1)HMM predict
1589Phosphoserine(CK2)HMM predict
1615Phosphoserine(CDK)HMM predict
1673Phosphoserine(ATM)HMM predict
1739Phosphoserine(PKA)HMM predict
1861Phosphotyrosine(Jak)HMM predict
1867Phosphoserine(PKG)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014976
  • Location:chr10 105146401-105196008
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Nanog ESGSE20650 105146033 105146582 549 94
P300 T30-glioblastomaGSE21026 105145802 105146903 1101 49
PHF8 293TGSE20725 105145544 105147071 1527 94
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 105166582 105166926 344 0
CTCF CD4SISSRdata 105166582 105166926 344 0
GABP HelaGSE8489 105147495 105148316 821 0
H3K4me3 colorectalcancer 105146478 105147155 677 0
H3ac HepG2E 105147495 105148207 712 0
KLF4 hESGSE17917 105165376 105165541 165 0
Oct1 HelaGSE14283 105170547 105170579 32 0
Oct1 HelaGSE14283 105178025 105178060 35 0
RARG MCF7GSE15244 105152781 105153160 379 0
RARG MCF7GSE15244 105166159 105166517 358 0
TAF k562GSE8489 105146478 105147155 677 0
TAF k562GSE8489 105189128 105189410 282 0
hScc1 BcellGSE12603 105166263 105166803 540 0
hScc1 CdLSGSE12603 105165510 105166803 1293 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved