AutismKB 2.0

Annotation Detail for PDXDC1


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Basic Information Top
Gene Symbol:PDXDC1 ( KIAA0251,LP8165 )
Gene Full Name: pyridoxal-dependent decarboxylase domain containing 1
Band: 16p13.11
Quick LinksEntrez ID:23042; OMIM: NA; Uniprot ID:PDXD1_HUMAN; ENSEMBL ID: ENSG00000179889; HGNC ID: 28995
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
212Phosphoserine (By similarity).
687Phosphothreonine (By similarity).
691Phosphothreonine.
718Phosphoserine (By similarity).
720Phosphothreonine.
721Phosphoserine.
722Phosphoserine.
724Phosphoserine.
737Phosphoserine.
757Phosphoserine.
779Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_015027
  • Location:chr16 14976486-15039686
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me2 HCT116GSE10453 14974766 14975916 1150 1146
H3ac HepG2E 14974665 14976024 1359 1142
HIF1 NormHepG2 14975693 14976292 599 494
USF2 HepG2E 14975212 14976328 1116 717
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 15023506 15023892 386 0
CTCF CD4SISSRdata 15023506 15023892 386 0
CTCF G2GSE9613 14976375 14977248 873 0
CTCF G2GSE9613 14990844 14991524 680 0
CTCF G2GSE9613 15023699 15023951 252 0
ER Breast-CancerGSE22609 14998101 14998401 300 0
ER MCF7GSE19013 14989543 14990263 720 0
ER MCF7GSE19013 14997667 14998624 957 0
ER MCF7GSE19013 15035496 15036218 722 0
FOXA1 MCF7GSE15244 14982272 14983146 874 0
FOXA1 MCF7GSE15244 14998231 14998580 349 0
H3K4me2 HCT116GSE10453 14977248 14978377 1129 0
H3K4me3 colorectalcancer 14977248 14978377 1129 0
H3ac HepG2E 14976968 14978597 1629 0
H3ac HepG2E 14980961 14981634 673 0
Myc K562GSE19551 15023504 15023910 406 0
PHF8 HeLaGSE20725 14975772 14977293 1521 0
PHF8 Hs68minusFBSGSE20725 14976062 14977061 999 0
RARA MCF7GSE15244 14998231 14998580 349 0
TFAP2C MCF7GSE21234 14997881 14998710 829 0
TFAP2C MCF7GSE21234 15036427 15037408 981 0
USF2 HepG2E 14980961 14981634 673 0
hScc1 CdLSGSE12603 15023371 15023991 620 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
9657 mRNA KIAA0251 chr16 14976486 15039687 351 mRNA NTAN1 chr16 15039217 15057334Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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