Annotation Detail for KDM4C
Basic Information Top
| Gene Symbol: | KDM4C ( FLJ25949,GASC1,JHDM3C,JMJD2C,KIAA0780,bA146B14.1 ) |
|---|---|
| Gene Full Name: | lysine (K)-specific demethylase 4C |
| Band: | 9p24.1 |
| Quick Links | Entrez ID:23081; OMIM: 605469; Uniprot ID:KDM4C_HUMAN; ENSEMBL ID: ENSG00000107077; HGNC ID: 17071 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 392 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|
| No data |
- RefSeq ID: NM_015061
- Location:chr9 6747653-7165646
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 6729352 | 6729472 | 120 | 18242 |
| CTCF | CD4 | SISSRdata | 6729352 | 6729472 | 120 | 18242 |
| ER | Fulvestrant-MCF7 | GSE14664 | 6731346 | 6731387 | 41 | 16287 |
| Fos | K562 | GSE19551 | 6746915 | 6748260 | 1345 | 66 |
| Nanog | hES | GSE18292 | 6729378 | 6729670 | 292 | 18130 |
| Rb | Growing | GSE19898 | 6747327 | 6747567 | 240 | 207 |
| Sox2 | hES | GSE18292 | 6729365 | 6729695 | 330 | 18124 |
| USF1 | HepG2 | E | 6746729 | 6747998 | 1269 | 290 |
| USF2 | HepG2 | E | 6746767 | 6747935 | 1168 | 303 |
| p130 | Quiescent | GSE19898 | 6747248 | 6747981 | 733 | 39 |
| p130 | Senescent | GSE19898 | 6747161 | 6748003 | 842 | 72 |
| p130 | shRbQuiescent | GSE19898 | 6747160 | 6748077 | 917 | 35 |
| p130 | shRbSenescent | GSE19898 | 6747030 | 6748194 | 1164 | 42 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| P300 | T30-glioblastoma | GSE21026 | 7175401 | 7176069 | 668 | 10089 |
| hScc1 | Bcell | GSE12603 | 7176213 | 7176497 | 284 | 10709 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 6817429 | 6817703 | 274 | 0 |
| CTCF | CD4 | GSE12889 | 7042694 | 7042928 | 234 | 0 |
| CTCF | CD4 | SISSRdata | 6817429 | 6817703 | 274 | 0 |
| CTCF | CD4 | SISSRdata | 7042694 | 7042928 | 234 | 0 |
| ER | MCF7 | GSE19013 | 7136925 | 7137490 | 565 | 0 |
| FOXA1 | MCF7 | GSE15244 | 7159731 | 7160336 | 605 | 0 |
| FOXA1 | MCF7 | GSE15244 | 7162795 | 7163455 | 660 | 0 |
| Fos | K562 | GSE19551 | 6769894 | 6770222 | 328 | 0 |
| Fos | K562 | GSE19551 | 6921774 | 6922255 | 481 | 0 |
| FoxA1 | MCF7 | MACSdata | 7136643 | 7136941 | 298 | 0 |
| H3K4me3 | colorectal | cancer | 6748944 | 6749388 | 444 | 0 |
| H3ac | HepG2 | E | 6748707 | 6749388 | 681 | 0 |
| H3ac | HepG2 | E | 6777536 | 6778575 | 1039 | 0 |
| HIF1 | Hypo | HepG2 | 6747388 | 6748073 | 685 | 0 |
| HIF1 | Norm | HepG2 | 6747606 | 6748182 | 576 | 0 |
| KLF4 | hES | GSE17917 | 6847607 | 6847767 | 160 | 0 |
| KLF4 | hES | GSE17917 | 7114944 | 7115272 | 328 | 0 |
| Myc | K562 | GSE19551 | 6886610 | 6886901 | 291 | 0 |
| Myc | K562 | GSE19551 | 6921932 | 6922427 | 495 | 0 |
| Myc | K562 | GSE19551 | 7057240 | 7057596 | 356 | 0 |
| Myc | hES | GSE17917 | 6747940 | 6748295 | 355 | 0 |
| Nanog | ES | GSE20650 | 6761665 | 6762203 | 538 | 0 |
| Nanog | ES | GSE20650 | 6766770 | 6767967 | 1197 | 0 |
| Nanog | ES | GSE20650 | 6788376 | 6788511 | 135 | 0 |
| Nanog | hES | GSE18292 | 6755296 | 6755689 | 393 | 0 |
| Nanog | hES | GSE18292 | 6761873 | 6762146 | 273 | 0 |
| Nanog | hES | GSE18292 | 6767066 | 6767878 | 812 | 0 |
| Nanog | hES | GSE18292 | 6788337 | 6788545 | 208 | 0 |
| Nanog | hES | GSE18292 | 7119430 | 7119855 | 425 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 6881964 | 6881993 | 29 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 6889207 | 6889236 | 29 | 0 |
| Oct1 | Hela | GSE14283 | 6881959 | 6881996 | 37 | 0 |
| Oct1 | Hela | GSE14283 | 6891160 | 6891193 | 33 | 0 |
| Oct1 | Hela | GSE14283 | 6915549 | 6915580 | 31 | 0 |
| Oct1 | Hela | GSE14283 | 6980119 | 6980161 | 42 | 0 |
| Oct1 | Hela | GSE14283 | 7013907 | 7013988 | 81 | 0 |
| Oct1 | Hela | GSE14283 | 7161383 | 7161450 | 67 | 0 |
| Oct4 | hES | GSE17917 | 7042646 | 7042947 | 301 | 0 |
| Oct4 | hES | GSE17917 | 7119225 | 7119657 | 432 | 0 |
| Oct4 | hES | GSE21916 | 6761610 | 6762189 | 579 | 0 |
| PHF8 | 293T | GSE20725 | 6747029 | 6748431 | 1402 | 0 |
| PHF8 | HeLa | GSE20725 | 6747268 | 6749180 | 1912 | 0 |
| Rb | Growing | GSE19898 | 6747637 | 6747861 | 224 | 0 |
| Rb | Growing | GSE19898 | 6928532 | 6928729 | 197 | 0 |
| STAT1 | HeLa | GSE12783 | 6911527 | 6913265 | 1738 | 0 |
| STAT1 | IFN | SISSRdata | 6912222 | 6913040 | 818 | 0 |
| Sox2 | hES | GSE18292 | 6761949 | 6762191 | 242 | 0 |
| Sox2 | hES | GSE18292 | 7119505 | 7119775 | 270 | 0 |
| TAF | Hela | GSE8489 | 6748906 | 6749620 | 714 | 0 |
| TAF | k562 | GSE8489 | 6748906 | 6749423 | 517 | 0 |
| TFAP2C | MCF7 | GSE21234 | 6819041 | 6819457 | 416 | 0 |
| TFAP2C | MCF7 | GSE21234 | 7136550 | 7137057 | 507 | 0 |
| USF1 | HepG2 | E | 6748599 | 6749423 | 824 | 0 |
| USF1 | HepG2 | E | 6835528 | 6836798 | 1270 | 0 |
| USF2 | HepG2 | E | 6835528 | 6836328 | 800 | 0 |
| hScc1 | Bcell | GSE12603 | 6817574 | 6817783 | 209 | 0 |
| hScc1 | Bcell | GSE12603 | 6824679 | 6825545 | 866 | 0 |
| hScc1 | Bcell | GSE12603 | 7042647 | 7042944 | 297 | 0 |
| hScc1 | CdLS | GSE12603 | 7042537 | 7043035 | 498 | 0 |
Validated miRNA targets