Annotation Detail for TRIM35
Basic Information Top
| Gene Symbol: | TRIM35 ( HLS5,KIAA1098,MAIR,MGC17233 ) |
|---|---|
| Gene Full Name: | tripartite motif-containing 35 |
| Band: | 8p21.2 |
| Quick Links | Entrez ID:23087; OMIM: NA; Uniprot ID:TRI35_HUMAN; ENSEMBL ID: ENSG00000104228; HGNC ID: 16285 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 4 | Phosphoserine. | |
| 8 | Phosphoserine. | |
| 65 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 8 | Phosphoserine | HMM predict |
| 8 | O-linked | HMM predict |
| 8 | Phosphoserine(ATM) | HMM predict |
| 8 | Phosphoserine(CDK) | HMM predict |
| 33 | Phosphothreonine(PKC) | HMM predict |
| 36 | S-palmitoyl | HMM predict |
| 72 | N-linked | HMM predict |
| 76 | N-linked | HMM predict |
| 77 | N-linked | HMM predict |
| 323 | Phosphoserine(CK1) | HMM predict |
| 352 | Phosphoserine(ATM) | HMM predict |
| 352 | Phosphoserine(PKC) | HMM predict |
| 418 | Phosphoserine(CDC2) | HMM predict |
| 418 | Phosphoserine(MAPK) | HMM predict |
| 470 | Methylarginine | HMM predict |
| 475 | Proline | HMM predict |
- RefSeq ID: NM_171982
- Location:chr8 27198320-27224750
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Rb | Senescent | GSE19898 | 27224252 | 27225348 | 1096 | 50 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T0-glioblastoma | GSE21026 | 27187827 | 27188217 | 390 | 10299 |
| CTCF | G2 | GSE9613 | 27197067 | 27197428 | 361 | 1073 |
| CTCF | G2 | GSE9613 | 27197770 | 27198023 | 253 | 424 |
| ER | E2-MCF7 | GSE14664 | 27187974 | 27188057 | 83 | 10305 |
| Fos | K562 | GSE19551 | 27187718 | 27188312 | 594 | 10306 |
| Nanog | ES | GSE20650 | 27187735 | 27188423 | 688 | 10242 |
| Nanog | hES | GSE18292 | 27187755 | 27187980 | 225 | 10453 |
| PolII | HeLa | GSE12783 | 27187704 | 27188587 | 883 | 10175 |
| Rb | shRbSenescence | GSE19898 | 27194623 | 27194741 | 118 | 3639 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 27200656 | 27201458 | 802 | 0 |
| CTCF | G2 | GSE9613 | 27202327 | 27203452 | 1125 | 0 |
| CTCF | G2 | GSE9613 | 27218928 | 27219176 | 248 | 0 |
| CTCF | G2 | GSE9613 | 27224170 | 27224674 | 504 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 27223559 | 27223904 | 345 | 0 |
| H3K4me3 | colorectal | cancer | 27223559 | 27224073 | 514 | 0 |
| H3ac | HepG2 | E | 27221796 | 27222887 | 1091 | 0 |
| H3ac | HepG2 | E | 27223559 | 27224048 | 489 | 0 |
| Myc | hES | GSE17917 | 27224455 | 27224673 | 218 | 0 |
| NRSF | pAb | Jurkat | 27201050 | 27201607 | 557 | 0 |
| Oct1 | Hela | GSE14283 | 27203297 | 27203328 | 31 | 0 |
| Oct1 | Hela | GSE14283 | 27203437 | 27203464 | 27 | 0 |
| PHF8 | HeLa | GSE20725 | 27223770 | 27225725 | 1955 | 0 |
| Rb | Quiescent | GSE19898 | 27224313 | 27224447 | 134 | 0 |
Validated miRNA targets