AutismKB 2.0

Annotation Detail for TRIM35


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Basic Information Top
Gene Symbol:TRIM35 ( HLS5,KIAA1098,MAIR,MGC17233 )
Gene Full Name: tripartite motif-containing 35
Band: 8p21.2
Quick LinksEntrez ID:23087; OMIM: NA; Uniprot ID:TRI35_HUMAN; ENSEMBL ID: ENSG00000104228; HGNC ID: 16285
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
4Phosphoserine.
8Phosphoserine.
65Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
8PhosphoserineHMM predict
8O-linkedHMM predict
8Phosphoserine(ATM)HMM predict
8Phosphoserine(CDK)HMM predict
33Phosphothreonine(PKC)HMM predict
36S-palmitoylHMM predict
72N-linkedHMM predict
76N-linkedHMM predict
77N-linkedHMM predict
323Phosphoserine(CK1)HMM predict
352Phosphoserine(ATM)HMM predict
352Phosphoserine(PKC)HMM predict
418Phosphoserine(CDC2)HMM predict
418Phosphoserine(MAPK)HMM predict
470MethylarginineHMM predict
475ProlineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_171982
  • Location:chr8 27198320-27224750
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Rb SenescentGSE19898 27224252 27225348 1096 50
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 27187827 27188217 390 10299
CTCF G2GSE9613 27197067 27197428 361 1073
CTCF G2GSE9613 27197770 27198023 253 424
ER E2-MCF7GSE14664 27187974 27188057 83 10305
Fos K562GSE19551 27187718 27188312 594 10306
Nanog ESGSE20650 27187735 27188423 688 10242
Nanog hESGSE18292 27187755 27187980 225 10453
PolII HeLaGSE12783 27187704 27188587 883 10175
Rb shRbSenescenceGSE19898 27194623 27194741 118 3639
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 27200656 27201458 802 0
CTCF G2GSE9613 27202327 27203452 1125 0
CTCF G2GSE9613 27218928 27219176 248 0
CTCF G2GSE9613 27224170 27224674 504 0
H3K4me2 HCT116GSE10453 27223559 27223904 345 0
H3K4me3 colorectalcancer 27223559 27224073 514 0
H3ac HepG2E 27221796 27222887 1091 0
H3ac HepG2E 27223559 27224048 489 0
Myc hESGSE17917 27224455 27224673 218 0
NRSF pAbJurkat 27201050 27201607 557 0
Oct1 HelaGSE14283 27203297 27203328 31 0
Oct1 HelaGSE14283 27203437 27203464 27 0
PHF8 HeLaGSE20725 27223770 27225725 1955 0
Rb QuiescentGSE19898 27224313 27224447 134 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018