AutismKB 2.0

Annotation Detail for MCF2L2


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Basic Information Top
Gene Symbol:MCF2L2 ( ARHGEF22,DKFZp686K0690,FLJ42509,KIAA0861 )
Gene Full Name: MCF.2 cell line derived transforming sequence-like 2
Band: 3q27.1
Quick LinksEntrez ID:23101; OMIM: NA; Uniprot ID:MF2L2_HUMAN; ENSEMBL ID: ENSG00000053524; HGNC ID: 30319
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_015078
  • Location:chr3 184378524-184628548
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 184628062 184629666 1604 316
CTCF G2GSE9613 184647905 184648375 470 19592
ETS1 JurkatGSE17954 184628742 184629658 916 652
FOXA1 MCF7GSE15244 184629254 184629702 448 930
H3K27me3 colorectalcancer 184629558 184629836 278 1149
H3K4me3 colorectalcancer 184629630 184629836 206 1185
KLF4 hESGSE17917 184647961 184648324 363 19594
Oct4 hESGSE17917 184647847 184648379 532 19565
PHF8 Hs68minusFBSGSE20725 184647633 184648724 1091 19630
hScc1 BcellGSE12603 184628884 184629333 449 560
hScc1 G2GSE9613 184628272 184629739 1467 457
p130 shRbQuiescentGSE19898 184647837 184648605 768 19673
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 184373890 184374242 352 4459
CTCF G2GSE9613 184376091 184376236 145 2361
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 184385857 184386782 925 0
CBP T30-glioblastomaGSE21026 184385892 184386843 951 0
CTCF CD4GSE12889 184385077 184385393 316 0
CTCF CD4GSE12889 184582965 184583158 193 0
CTCF CD4GSE12889 184586466 184586891 425 0
CTCF CD4SISSRdata 184385077 184385393 316 0
CTCF CD4SISSRdata 184582965 184583158 193 0
CTCF CD4SISSRdata 184586466 184586891 425 0
CTCF G2GSE9613 184379621 184379953 332 0
CTCF G2GSE9613 184380298 184380511 213 0
CTCF G2GSE9613 184381464 184382151 687 0
CTCF G2GSE9613 184383108 184383441 333 0
CTCF G2GSE9613 184384813 184385355 542 0
CTCF G2GSE9613 184389740 184390088 348 0
CTCF G2GSE9613 184424974 184425475 501 0
CTCF G2GSE9613 184449686 184450241 555 0
CTCF G2GSE9613 184451109 184451574 465 0
CTCF G2GSE9613 184500329 184500962 633 0
CTCF G2GSE9613 184556395 184556661 266 0
CTCF G2GSE9613 184582858 184583527 669 0
CTCF G2GSE9613 184586187 184587074 887 0
CTCF G2GSE9613 184600882 184601279 397 0
CTCF G2GSE9613 184625477 184625865 388 0
ER MCF7GSE19013 184383160 184384019 859 0
ER MCF7GSE19013 184541527 184542226 699 0
FOXA1 MCF7GSE15244 184393481 184393780 299 0
FOXA1 MCF7GSE15244 184394113 184395200 1087 0
FOXA1 MCF7GSE15244 184491471 184492688 1217 0
FOXA1 MCF7GSE15244 184495559 184497561 2002 0
FOXA1 MCF7GSE15244 184501523 184501931 408 0
FOXA1 MCF7GSE15244 184576160 184576690 530 0
FOXA1 MCF7GSE15244 184579492 184579993 501 0
FOXA1 MCF7GSE15244 184581639 184582138 499 0
Fos K562GSE19551 184610598 184611177 579 0
FoxA1 MCF7MACSdata 184394242 184394512 270 0
FoxA1 MCF7MACSdata 184492099 184492731 632 0
FoxA1 MCF7MACSdata 184495810 184496170 360 0
FoxA1 MCF7MACSdata 184579459 184579720 261 0
Gata1 K562GSE18868 184561565 184562214 649 0
Gata2 K562GSE18868 184561652 184562207 555 0
H3K27me3 colorectalcancer 184626562 184627789 1227 0
Myc K562GSE19551 184499246 184499820 574 0
Myc K562GSE19551 184507364 184507880 516 0
Myc K562GSE19551 184597283 184597501 218 0
NRSF mAbJurkat 184378995 184379285 290 0
Nanog hESGSE18292 184617815 184618219 404 0
P300 T0-glioblastomaGSE21026 184385875 184386884 1009 0
P300 T30-glioblastomaGSE21026 184385891 184386871 980 0
P300 T30-glioblastomaGSE21026 184571043 184572224 1181 0
RARA MCF7GSE15244 184394113 184395200 1087 0
RARA MCF7GSE15244 184486206 184487848 1642 0
RARA MCF7GSE15244 184491471 184492688 1217 0
RARA MCF7GSE15244 184495559 184496825 1266 0
RARA MCF7GSE15244 184507349 184508300 951 0
RARG MCF7GSE15244 184394152 184395200 1048 0
RARG MCF7GSE15244 184486393 184486923 530 0
RARG MCF7GSE15244 184491471 184492688 1217 0
RARG MCF7GSE15244 184495559 184497454 1895 0
RARG MCF7GSE15244 184507313 184508335 1022 0
TFAP2C MCF7GSE21234 184379951 184380336 385 0
TFAP2C MCF7GSE21234 184394027 184394918 891 0
TFAP2C MCF7GSE21234 184495515 184497182 1667 0
TFAP2C MCF7GSE21234 184571046 184571901 855 0
USF1 HepG2E 184411651 184412315 664 0
hScc1 BcellGSE12603 184379621 184380064 443 0
hScc1 BcellGSE12603 184397109 184397466 357 0
hScc1 BcellGSE12603 184582858 184583492 634 0
hScc1 BcellGSE12603 184586483 184586883 400 0
hScc1 BcellGSE12603 184628017 184628417 400 0
hScc1 CdLSGSE12603 184385181 184385355 174 0
hScc1 CdLSGSE12603 184582858 184583527 669 0
hScc1 CdLSGSE12603 184586187 184587038 851 0
hScc1 G2GSE9613 184383140 184383441 301 0
hScc1 G2GSE9613 184582858 184583527 669 0
hScc1 G2GSE9613 184586012 184586956 944 0
p63 keratinocytesGSE17611 184421091 184421916 825 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
19075 mRNA B3GNT5 chr3 184453746 184473880 1045 mRNA MCF2L2 chr3 184472509 184628591Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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