AutismKB 2.0

Annotation Detail for ATG2A


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Basic Information Top
Gene Symbol:ATG2A ( KIAA0404,MGC117153 )
Gene Full Name: ATG2 autophagy related 2 homolog A (S. cerevisiae)
Band: 11q13.1
Quick LinksEntrez ID:23130; OMIM: NA; Uniprot ID:ATG2A_HUMAN; ENSEMBL ID: ENSG00000110046; HGNC ID: 29028
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
258Phosphotyrosine.
892Phosphoserine (By similarity).
894Phosphoserine (By similarity).
1301Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_015104
  • Location:chr11 64418594-64441238
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 64441043 64441913 870 240
PHF8 Hs68plusFBSGSE20725 64440729 64441755 1026 4
Rb GrowingGSE19898 64441221 64441512 291 128
Rb QuiescentGSE19898 64441259 64441520 261 151
Rb SenescentGSE19898 64441059 64441757 698 170
Rb shRbSenescenceGSE19898 64441298 64441515 217 168
hScc1 CdLSGSE12603 64441178 64441491 313 96
p130 QuiescentGSE19898 64441282 64441702 420 254
p130 SenescentGSE19898 64440993 64441655 662 86
p130 shRbQuiescentGSE19898 64441043 64441608 565 87
p130 shRbSenescentGSE19898 64441227 64441601 374 176
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 64412026 64412210 184 6477
CTCF CD4GSE12889 64418395 64418674 279 60
CTCF CD4SISSRdata 64412026 64412210 184 6477
CTCF CD4SISSRdata 64418395 64418674 279 60
CTCF HelaGSE12889 64418390 64418614 224 93
CTCF JurkatGSE12889 64418389 64418626 237 87
Gata1 K562GSE18868 64412704 64413507 803 5489
Gata2 K562GSE18868 64412693 64413661 968 5418
H3ac HepG2E 64411360 64411781 421 7024
H3ac HepG2E 64416370 64417320 950 1750
Stat6 IL-4-hr1GSE17850 64412845 64413570 725 5387
TAFII hESGSE17917 64411986 64412314 328 6445
hScc1 CdLSGSE12603 64411781 64412518 737 6445
hScc1 CdLSGSE12603 64418293 64418822 529 37
hScc1 G2GSE9613 64418293 64418796 503 50
p130 QuiescentGSE19898 64418359 64418567 208 132
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 DLD1GSE12801 64440184 64440659 475 0
FOXA1 MCF7GSE15244 64440227 64440759 532 0
FoxA1 MCF7MACSdata 64440379 64440613 234 0
H3ac HepG2E 64439148 64441149 2001 0
NFkBII GM12878GSE19485 64423986 64425102 1116 0
NRSF pAbJurkat 64420405 64421047 642 0
NRSF pAbJurkat 64426524 64427385 861 0
NRSF pAbJurkat 64431086 64431546 460 0
NRSF pAbJurkat 64436123 64436522 399 0
Oct1 H2O2-HelaGSE14283 64420196 64420223 27 0
Oct1 HelaGSE14283 64420182 64420223 41 0
PHF8 293TGSE20725 64440613 64441575 962 0
PHF8 HeLaGSE20725 64440441 64441710 1269 0
RARA MCF7GSE15244 64429285 64429539 254 0
Rb QuiescentGSE19898 64440872 64441255 383 0
Rb SenescentGSE19898 64440381 64440911 530 0
hScc1 BcellGSE12603 64418230 64420237 2007 0
hScc1 BcellGSE12603 64430639 64431283 644 0
hScc1 BcellGSE12603 64436167 64436522 355 0
hScc1 BcellGSE12603 64437290 64438540 1250 0
hScc1 BcellGSE12603 64440625 64441379 754 0
p130 QuiescentGSE19898 64440076 64440561 485 0
p130 shRbSenescentGSE19898 64440940 64441183 243 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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