Annotation Detail for FAM120A
Basic Information Top
| Gene Symbol: | FAM120A ( C9orf10,DNAPTP1,DNAPTP5,MGC111527,MGC133257,OSSA ) |
|---|---|
| Gene Full Name: | family with sequence similarity 120A |
| Band: | 9q22.31 |
| Quick Links | Entrez ID:23196; OMIM: 612265; Uniprot ID:F120A_HUMAN; ENSEMBL ID: ENSG00000048828; HGNC ID: 13247 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 30 | Phosphoserine. | |
| 383 | Phosphoserine. | |
| 393 | Phosphotyrosine. | |
| 395 | Phosphotyrosine. | |
| 982 | Omega-N-methylated arginine. | |
| 991 | Phosphothreonine. | |
| 1023 | Phosphoserine. | |
| 1044 | Phosphoserine. | |
| 1045 | Phosphoserine. | |
| 1048 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 383 | Phosphoserine. | Swiss-Prot 53.0 |
| 393 | Phosphotyrosine. | Swiss-Prot 53.0 |
| 393 | Phosphotyrosine | Phospho.ELM 6.0 |
| 395 | Phosphotyrosine. | Swiss-Prot 53.0 |
| 395 | Phosphotyrosine | Phospho.ELM 6.0 |
| 982 | Omega-N-methylated arginine. | Swiss-Prot 53.0 |
| 991 | Phosphothreonine. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 9 | Phosphotyrosine(EGFR) | HMM predict |
| 42 | Phosphothreonine(MAPK) | HMM predict |
| 42 | Phosphothreonine(CDK) | HMM predict |
| 189 | Phosphotyrosine(INSR) | HMM predict |
| 215 | Phosphoserine(ATM) | HMM predict |
| 383 | Phosphoserine(CDC2) | HMM predict |
| 383 | Phosphoserine(CDK) | HMM predict |
| 383 | O-linked | HMM predict |
| 411 | N-linked | HMM predict |
| 416 | N-linked | HMM predict |
| 435 | Phosphoserine(CDC2) | HMM predict |
| 458 | O-linked | HMM predict |
| 460 | Phosphoserine(CK1) | HMM predict |
| 462 | Phosphoserine(ATM) | HMM predict |
| 462 | Phosphoserine(CK2) | HMM predict |
| 506 | Phosphoserine(CK2) | HMM predict |
| 506 | O-linked | HMM predict |
| 507 | O-linked | HMM predict |
| 513 | Phosphoserine(ATM) | HMM predict |
| 608 | Phosphotyrosine(Jak) | HMM predict |
| 623 | Phosphothreonine(PKC) | HMM predict |
| 652 | Phosphoserine(CDC2) | HMM predict |
| 655 | Phosphothreonine(MAPK) | HMM predict |
| 699 | Phosphothreonine(PKA) | HMM predict |
| 841 | Phosphoserine(PKG) | HMM predict |
| 884 | Methylarginine | HMM predict |
| 898 | Phosphotyrosine(Abl) | HMM predict |
| 931 | Phosphoserine(CK1) | HMM predict |
| 931 | Phosphoserine | HMM predict |
| 942 | Phosphoserine(ATM) | HMM predict |
| 982 | Methylarginine | HMM predict |
| 999 | Methylarginine | HMM predict |
| 1035 | Phosphoserine(CK2) | HMM predict |
| 1044 | Phosphoserine(CK1) | HMM predict |
| 1048 | Phosphoserine(IKK) | HMM predict |
- RefSeq ID: NM_014612
- Location:chr9 95253993-95368216
- strand:+
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 95368401 | 95368957 | 556 | 463 |
| CTCF | CD4 | SISSRdata | 95368401 | 95368957 | 556 | 463 |
| CTCF | Hela | GSE12889 | 95368371 | 95368737 | 366 | 338 |
| ETS1 | Jurkat | GSE17954 | 95368377 | 95369864 | 1487 | 904 |
| PHF8 | HeLa | GSE20725 | 95368472 | 95369499 | 1027 | 769 |
| PHF8 | Hs68plusFBS | GSE20725 | 95368445 | 95369590 | 1145 | 801 |
| TFAP2C | MCF7 | GSE21234 | 95368416 | 95368977 | 561 | 480 |
| hScc1 | Bcell | GSE12603 | 95368456 | 95369230 | 774 | 627 |
| hScc1 | CdLS | GSE12603 | 95368236 | 95368797 | 561 | 300 |
| p130 | Quiescent | GSE19898 | 95369515 | 95369663 | 148 | 1373 |
| p130 | Quiescent | GSE19898 | 95370340 | 95370491 | 151 | 2199 |
| p130 | shRbQuiescent | GSE19898 | 95368709 | 95369435 | 726 | 856 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | Fulvestrant-MCF7 | GSE14664 | 95325427 | 95325469 | 42 | 0 |
| ER | MCF7 | GSE19013 | 95329285 | 95329767 | 482 | 0 |
| ER | MCF7 | GSE19013 | 95336065 | 95336708 | 643 | 0 |
| FOXA1 | MCF7 | GSE15244 | 95266439 | 95266990 | 551 | 0 |
| FOXA1 | MCF7 | GSE15244 | 95298893 | 95299836 | 943 | 0 |
| Fos | K562 | GSE19551 | 95255341 | 95256053 | 712 | 0 |
| GABP | k562 | GSE8489 | 95254910 | 95256884 | 1974 | 0 |
| Myc | K562 | GSE19551 | 95327509 | 95327868 | 359 | 0 |
| Nanog | ES | GSE20650 | 95357444 | 95357871 | 427 | 0 |
| Nanog | hES | GSE18292 | 95357354 | 95357877 | 523 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 95309467 | 95309504 | 37 | 0 |
| Oct1 | Hela | GSE14283 | 95305800 | 95305833 | 33 | 0 |
| Oct1 | Hela | GSE14283 | 95309465 | 95309502 | 37 | 0 |
| Oct1 | Hela | GSE14283 | 95332869 | 95332924 | 55 | 0 |
| Rb | shRbQuiescent | GSE19898 | 95325701 | 95325969 | 268 | 0 |
| SRF | Hela | GSE8489 | 95280343 | 95280560 | 217 | 0 |
| Stat6 | IL-4-hr1 | GSE17850 | 95269410 | 95269979 | 569 | 0 |
| TAF | Hela | GSE8489 | 95280343 | 95280560 | 217 | 0 |
| TAF | Hela | GSE8489 | 95283888 | 95284247 | 359 | 0 |
| TAF | k562 | GSE8489 | 95254875 | 95256640 | 1765 | 0 |
| TFAP2C | MCF7 | GSE21234 | 95261563 | 95262052 | 489 | 0 |
| TFAP2C | MCF7 | GSE21234 | 95313126 | 95313840 | 714 | 0 |
| hScc1 | Bcell | GSE12603 | 95302204 | 95302420 | 216 | 0 |
| hScc1 | Bcell | GSE12603 | 95318078 | 95318446 | 368 | 0 |
| p130 | shRbSenescent | GSE19898 | 95271038 | 95271316 | 278 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26743 | mRNA | C9orf10 | chr9 | 93293727 | 93407946 | 243 | mRNA | C9orf10OS | chr9 | 93288337 | 93295429 | Sense/Antisense (SA) pairs |