Annotation Detail for VPS13A
Basic Information Top
| Gene Symbol: | VPS13A ( CHAC,CHOREIN,FLJ42030,KIAA0986 ) |
|---|---|
| Gene Full Name: | vacuolar protein sorting 13 homolog A (S. cerevisiae) |
| Band: | 9q21.2 |
| Quick Links | Entrez ID:23230; OMIM: 605978; Uniprot ID:VP13A_HUMAN; ENSEMBL ID: ENSG00000197969; HGNC ID: 1908 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 2240 | Phosphotyrosine (By similarity). | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 25 | Phosphoserine(ATM) | HMM predict |
| 49 | Phosphoserine(CK1) | HMM predict |
| 228 | Sulfotyrosine | HMM predict |
| 228 | Phosphotyrosine(Jak) | HMM predict |
| 374 | Phosphothreonine(PKC) | HMM predict |
| 397 | N-linked | HMM predict |
| 442 | Phosphothreonine(CK2) | HMM predict |
| 459 | Phosphothreonine(MAPK) | HMM predict |
| 665 | Phosphoserine(CDC2) | HMM predict |
| 682 | Phosphoserine(CK1) | HMM predict |
| 734 | Phosphoserine(IKK) | HMM predict |
| 734 | Phosphoserine(PKG) | HMM predict |
| 734 | Phosphoserine(CK1) | HMM predict |
| 734 | Phosphoserine(CAMK2) | HMM predict |
| 815 | O-linked | HMM predict |
| 822 | Phosphoserine(ATM) | HMM predict |
| 835 | Phosphoserine(CK2) | HMM predict |
| 839 | Phosphoserine(CK1) | HMM predict |
| 849 | Phosphoserine(MAPK) | HMM predict |
| 877 | N-linked | HMM predict |
| 966 | Phosphotyrosine(Jak) | HMM predict |
| 990 | N-linked | HMM predict |
| 1025 | O-linked | HMM predict |
| 1025 | Phosphoserine(IKK) | HMM predict |
| 1026 | O-linked | HMM predict |
| 1071 | N-linked | HMM predict |
| 1139 | Phosphotyrosine(INSR) | HMM predict |
| 1223 | Phosphoserine(CDC2) | HMM predict |
| 1249 | Phosphoserine(ATM) | HMM predict |
| 1252 | Phosphoserine(PKA) | HMM predict |
| 1252 | Phosphoserine(IKK) | HMM predict |
| 1252 | O-linked | HMM predict |
| 1324 | Phosphoserine(ATM) | HMM predict |
| 1348 | Phosphoserine(CDC2) | HMM predict |
| 1352 | Phosphothreonine(PKC) | HMM predict |
| 1356 | Phosphotyrosine(Jak) | HMM predict |
| 1357 | O-linked | HMM predict |
| 1365 | N-linked | HMM predict |
| 1370 | O-linked | HMM predict |
| 1469 | Phosphothreonine(PKA) | HMM predict |
| 1529 | O-linked | HMM predict |
| 1593 | N-linked | HMM predict |
| 1681 | Phosphoserine(CK1) | HMM predict |
| 1752 | Phosphoserine(CK2) | HMM predict |
| 1774 | Sulfotyrosine | HMM predict |
| 1775 | Phosphotyrosine(Syk) | HMM predict |
| 1817 | Phosphoserine(CK2) | HMM predict |
| 1824 | Phosphotyrosine(Syk) | HMM predict |
| 1824 | Phosphotyrosine(Abl) | HMM predict |
| 1824 | Phosphotyrosine(SRC) | HMM predict |
| 1824 | Sulfotyrosine | HMM predict |
| 1824 | Phosphotyrosine(INSR) | HMM predict |
| 1824 | Phosphotyrosine(Jak) | HMM predict |
| 1842 | N-linked | HMM predict |
| 1889 | Phosphoserine(ATM) | HMM predict |
| 1897 | Phosphoserine(CK1) | HMM predict |
| 1947 | N-linked | HMM predict |
| 1965 | Phosphothreonine(PKC) | HMM predict |
| 1991 | Phosphothreonine(PKC) | HMM predict |
| 1994 | Phosphoserine(CDC2) | HMM predict |
| 2019 | Phosphoserine(CDC2) | HMM predict |
| 2044 | Phosphotyrosine(Syk) | HMM predict |
| 2071 | N-linked | HMM predict |
| 2087 | N-linked | HMM predict |
| 2095 | Phosphoserine(CK1) | HMM predict |
| 2219 | N-linked | HMM predict |
| 2266 | Phosphoserine(IKK) | HMM predict |
| 2304 | N-linked | HMM predict |
| 2319 | N-linked | HMM predict |
| 2418 | N-linked | HMM predict |
| 2422 | N-linked | HMM predict |
| 2428 | N-linked | HMM predict |
| 2433 | Phosphoserine(CK2) | HMM predict |
| 2433 | Phosphoserine(CK2) | HMM predict |
| 2433 | Phosphoserine(CK1) | HMM predict |
| 2514 | Phosphoserine(CK2) | HMM predict |
| 2538 | N-linked | HMM predict |
| 2558 | Phosphothreonine(PKC) | HMM predict |
| 2584 | Phosphotyrosine(INSR) | HMM predict |
| 2590 | Phosphoserine(CK1) | HMM predict |
| 2635 | N-linked | HMM predict |
| 2783 | Phosphoserine(CDC2) | HMM predict |
| 2792 | Phosphoserine(PKG) | HMM predict |
| 2941 | Sulfotyrosine | HMM predict |
| 3028 | Phosphothreonine(PKA) | HMM predict |
| 3082 | N-linked | HMM predict |
- RefSeq ID: NM_001018037
- Location:chr9 78982180-79222216
- strand:+
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26612 | mRNA | VPS13A | chr9 | 77021914 | 77229553 | 178 | EST | chr9 | 77021229 | 77022464 | Sense/Antisense (SA) pairs | |