AutismKB 2.0

Annotation Detail for KIAA0556


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Basic Information Top
Gene Symbol:KIAA0556 ( - )
Gene Full Name: KIAA0556
Band: 16p12.1
Quick LinksEntrez ID:23247; OMIM: NA; Uniprot ID:K0556_HUMAN; ENSEMBL ID: ENSG00000047578; HGNC ID: 29068
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
453Phosphoserine.
691Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_015202
  • Location:chr16 27468970-27699189
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 27468569 27469227 658 73
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 27704009 27704264 255 4947
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 27558708 27558815 107 0
CTCF CD4GSE12889 27609496 27609684 188 0
CTCF CD4SISSRdata 27558708 27558815 107 0
CTCF CD4SISSRdata 27609496 27609684 188 0
CTCF HelaGSE12889 27609505 27609711 206 0
CTCF JurkatGSE12889 27558688 27559002 314 0
CTCF G2GSE9613 27513220 27513398 178 0
CTCF G2GSE9613 27524306 27524641 335 0
CTCF G2GSE9613 27533656 27533908 252 0
CTCF G2GSE9613 27558435 27559650 1215 0
CTCF G2GSE9613 27609357 27609577 220 0
CTCF G2GSE9613 27617089 27617606 517 0
CTCF G2GSE9613 27625742 27626098 356 0
CTCF G2GSE9613 27641780 27642081 301 0
CTCF G2GSE9613 27645631 27645977 346 0
CTCF G2GSE9613 27647554 27647849 295 0
CTCF G2GSE9613 27673892 27674151 259 0
CTCF G2GSE9613 27679676 27679924 248 0
CTCF G2GSE9613 27692057 27692228 171 0
CTCF G2GSE9613 27697695 27698023 328 0
ER E2-MCF7GSE14664 27543035 27543076 41 0
FOXA1 MCF7GSE15244 27474973 27475795 822 0
Fos K562GSE19551 27667621 27668105 484 0
FoxA1 MCF7MACSdata 27547072 27547242 170 0
GABP k562GSE8489 27468973 27470236 1263 0
Gata2 K562GSE18868 27675056 27675489 433 0
H3K4me3 colorectalcancer 27469122 27469901 779 0
H3ac HepG2E 27469057 27470236 1179 0
Myc K562GSE19551 27667687 27668099 412 0
Nanog hESGSE18292 27572234 27572479 245 0
Oct1 H2O2-HelaGSE14283 27534163 27534197 34 0
Oct1 H2O2-HelaGSE14283 27554884 27554914 30 0
Oct1 H2O2-HelaGSE14283 27609714 27609753 39 0
Oct1 H2O2-HelaGSE14283 27660218 27660259 41 0
Oct1 HelaGSE14283 27534162 27534197 35 0
Oct1 HelaGSE14283 27543042 27543071 29 0
Oct1 HelaGSE14283 27609714 27609752 38 0
Oct1 HelaGSE14283 27660218 27660256 38 0
P300 T30-glioblastomaGSE21026 27497111 27498240 1129 0
P300 T30-glioblastomaGSE21026 27688513 27689332 819 0
Rb GrowingGSE19898 27648329 27648630 301 0
Rb SenescentGSE19898 27538519 27538714 195 0
TAF HelaGSE8489 27468973 27469414 441 0
TFAP2C MCF7GSE21234 27497264 27497867 603 0
TFAP2C MCF7GSE21234 27516063 27516644 581 0
TFAP2C MCF7GSE21234 27656319 27658026 1707 0
TFAP2C MCF7GSE21234 27661088 27661657 569 0
TFAP2C MCF7GSE21234 27667509 27668275 766 0
hScc1 BcellGSE12603 27524447 27524641 194 0
hScc1 BcellGSE12603 27609357 27609577 220 0
hScc1 BcellGSE12603 27617089 27617311 222 0
hScc1 BcellGSE12603 27647554 27647732 178 0
hScc1 BcellGSE12603 27651571 27651801 230 0
hScc1 CdLSGSE12603 27558543 27559108 565 0
p130 QuiescentGSE19898 27468874 27469505 631 0
p130 shRbQuiescentGSE19898 27468737 27469417 680 0
p130 shRbSenescentGSE19898 27468835 27469637 802 0
p63 keratinocytesGSE17611 27498256 27499060 804 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
9784 mRNA KIAA0556 chr16 27468970 27699190 216 HTC chr16 27627244 27637626Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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