Annotation Detail for SCFD1
Basic Information Top
| Gene Symbol: | SCFD1 ( C14orf163,KIAA0917,RA410,SLY1,STXBP1L2 ) |
|---|---|
| Gene Full Name: | sec1 family domain containing 1 |
| Band: | 14q12 |
| Quick Links | Entrez ID:23256; OMIM: NA; Uniprot ID:SCFD1_HUMAN; ENSEMBL ID: ENSG00000092108; HGNC ID: 20726 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 2 | N-acetylalanine. | |
| 57 | Phosphoserine. | |
| 303 | Phosphoserine. | |
| 528 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 56 | Phosphoserine | Phospho.ELM 6.0 |
| 57 | Phosphoserine. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 8 | O-linked | HMM predict |
| 36 | N-linked | HMM predict |
| 57 | Phosphoserine(MAPK) | HMM predict |
| 111 | Phosphotyrosine(SRC) | HMM predict |
| 298 | Phosphoserine(CK1) | HMM predict |
| 430 | Phosphoserine(CK1) | HMM predict |
| 449 | Phosphothreonine(CDC2) | HMM predict |
| 508 | O-linked | HMM predict |
| 528 | Phosphoserine(ATM) | HMM predict |
| 566 | Sulfotyrosine | HMM predict |
| 577 | N-linked | HMM predict |
| 601 | Phosphotyrosine(INSR) | HMM predict |
| 628 | N-linked | HMM predict |
- RefSeq ID: NM_016106
- Location:chr14 30161271-30274768
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| GABP | Hela | GSE8489 | 30160616 | 30161169 | 553 | 379 |
| H3K4me3 | colorectal | cancer | 30160616 | 30161139 | 523 | 394 |
| PHF8 | Hs68plusFBS | GSE20725 | 30160180 | 30162019 | 1839 | 172 |
| PolII | HeLa | GSE12783 | 30159949 | 30162371 | 2422 | 112 |
| RARA | MCF7 | GSE15244 | 30160616 | 30161566 | 950 | 181 |
| RARG | MCF7 | GSE15244 | 30160616 | 30161566 | 950 | 181 |
| TAF | Hela | GSE8489 | 30160616 | 30161081 | 465 | 423 |
| TAF | k562 | GSE8489 | 30160616 | 30161851 | 1235 | 38 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | E2-MCF7 | GSE14664 | 30288409 | 30288442 | 33 | 13657 |
| ER | Fulvestrant-MCF7 | GSE14664 | 30288408 | 30288444 | 36 | 13658 |
| Nanog | hES | GSE18292 | 30285847 | 30286074 | 227 | 11192 |
| Oct1 | H2O2-Hela | GSE14283 | 30282347 | 30282381 | 34 | 7596 |
| Oct1 | Hela | GSE14283 | 30282342 | 30282383 | 41 | 7594 |
| Oct1 | Hela | GSE14283 | 30288409 | 30288441 | 32 | 13657 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 30195119 | 30195400 | 281 | 0 |
| CTCF | CD4 | SISSRdata | 30195119 | 30195400 | 281 | 0 |
| H3ac | HepG2 | E | 30160616 | 30164497 | 3881 | 0 |
| H3ac | HepG2 | E | 30229808 | 30230722 | 914 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 30190156 | 30190198 | 42 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 30225608 | 30225643 | 35 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 30234059 | 30234085 | 26 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 30245650 | 30245678 | 28 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 30270111 | 30270143 | 32 | 0 |
| Oct1 | Hela | GSE14283 | 30190147 | 30190198 | 51 | 0 |
| Oct1 | Hela | GSE14283 | 30225599 | 30225645 | 46 | 0 |
| Oct1 | Hela | GSE14283 | 30234054 | 30234086 | 32 | 0 |
| Oct1 | Hela | GSE14283 | 30245646 | 30245711 | 65 | 0 |
| Oct1 | Hela | GSE14283 | 30270111 | 30270143 | 32 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 30160685 | 30161882 | 1197 | 0 |
| PHF8 | HeLa | GSE20725 | 30160913 | 30161773 | 860 | 0 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 30165901 | 30165995 | 94 | 0 |
| TAF | k562 | GSE8489 | 30162158 | 30164420 | 2262 | 0 |
| USF1 | HepG2 | E | 30187960 | 30188156 | 196 | 0 |
Validated miRNA targets