AutismKB 2.0

Annotation Detail for CSTF2T


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Basic Information Top
Gene Symbol:CSTF2T ( CstF-64T,DKFZp434C1013,KIAA0689 )
Gene Full Name: cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
Band: 10q21.1
Quick LinksEntrez ID:23283; OMIM: 611968; Uniprot ID:CSTFT_HUMAN; ENSEMBL ID: ENSG00000177613; HGNC ID: 17086
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
557Phosphoserine.
563Phosphoserine.
567Phosphoserine.
Location(AA) Modifications Resource
563Phosphoserine.Swiss-Prot 53.0
563PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
64SulfotyrosineHMM predict
64Phosphotyrosine(Syk)HMM predict
205Phosphoserine(ATM)HMM predict
209Phosphoserine(IKK)HMM predict
209O-linkedHMM predict
211Phosphoserine(IKK)HMM predict
211O-linkedHMM predict
279O-linkedHMM predict
281Phosphothreonine(MAPK)HMM predict
320Phosphothreonine(MAPK)HMM predict
354Phosphotyrosine(Abl)HMM predict
354Phosphotyrosine(Syk)HMM predict
376Phosphoserine(PKB)HMM predict
410MethylarginineHMM predict
468MethylarginineHMM predict
557Phosphoserine(IKK)HMM predict
557Phosphoserine(ATM)HMM predict
560O-linkedHMM predict
561Phosphoserine(IKK)HMM predict
563Phosphoserine(CDK)HMM predict
563Phosphoserine(CDC2)HMM predict
563O-linkedHMM predict
567Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_015235
  • Location:chr10 53125252-53129360
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
GABP HelaGSE8489 53127937 53130342 2405 0
GABP k562GSE8489 53125909 53130342 4433 0
H3K4me3 colorectalcancer 53128186 53129672 1486 0
H3ac HepG2E 53128409 53129481 1072 0
RARG MCF7GSE15244 53128585 53129700 1115 0
Rb QuiescentGSE19898 53128893 53129797 904 0
hScc1 BcellGSE12603 53128920 53129554 634 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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